Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele30g1142 | ATGAACGACATAATCAGGAGGGTTGCTTTGGCTTTCATTGTTGCATTAAGCTGCTATTCGGAGCAAGTTTCATGTCAGAGCACCAATCAAAGCCAAGCTGCGGTTCAGCTCGTAGCCCAGGCCGTTTACGGAAGCATGTCTAGTTTCACGGGCGTCTTCAAGGATGAAATAAAAAAGAATTTGGGTTTCTGCATCGTTGATGTAGATGCTGATTGGGATGGGGCGTTTAATTTCACCAATGATCTGACATTTTTGACCTCATGTTCCCAATCTTTAAAAGGAGATATTTCACAGCGCATATGCACAGCAGCAGAAATCAAGTTATATGCCAGTGGTTTTGACATAAAGTCAAAGAGCCAATCTAACAACTTGCAGCCCAACAAGAACTGCAACTTGAGCGTCTGGCTTAATGGGTGTGAGCCTGGATGGGGCTGTATTGCTGCTGAGAAAGTTCAACTTAACAATACTAAGGACATCCCTGACAGGTCTACTGACTGTCAGCCTTGTTGTCCGGGTTTCTTTTGCCCACGCGGCATTACTTGCATGATACCTTGCCCCTTGGGTTCTTACTGCCCACGTGGACAGCTCAATCAAGCTACGGGAATATGTGAACCGTATCATTATCAGCTACCTGCTGGAAAGACAGACCACAGTTGTGGGGGAGCAGATGTTTGGGCAGACATTTCAAGCAGTTGGGATGTTTTCTGTTCATCTGGATCTTACTGTCCGTCCTCCATCCAAAAAAATCCTTGCACTCAGGGACATTATTGCAGGACGGGTTCAACCCATCAAGAAAGTTGTTTCAAATTGGCGAGTTGTAAGCCTCAGTCAGCTAATCAAAATATAACTGCATATGGTGTCATGGTTTTTGCTGGCTTGAGCTTCTTGCTTATCATCATATATAATTGTTCTGACCAAGTTCTTGCAACTCGAGAAAGAAGAATAGCAAAATCAAGAGAAAGGGCTGCTGCGAGTGTAAGAGAAACACAAGCACGTGAAAAATGGAAATCAGCTAAAGACATTGCTAAGAAGCACGCAGTAGGACTGCAAAGTTCTTTATCACGTACGTTTTCTCGTAGAAAATCTATGAAGGGAGATCTGAAAGCTTTTGGTTCTAAATCTGCATCAGAAACTCCCTTTCCACCTGCGCCACCAGCAGGTGCTGGTAAATCATCTGCAGCATCAAAAGGAAAAAAGGATAAAACTAGCCTCACAAAAATGATCCAGAACATTGAGGAAGACCCTGATAGTCAGGAAGGCTTTCATGTTGAGATAGGAGATAAAAATATCAAAAAACAAGCACCAAAAGGCAAGCAACTGCATACGCAAAGCCAAATTTTTAAGTATGCGTATGGTCAAATTGAAAAAGAAAAGGCTATGCAGGAACAAAACAAGAACCTGACCTTCTCTGGAGTTATCTCAATGGCTAGTGATATTGAGATCAGGAAGAGGCCTACAATTCAGGTTGCTTTCAAAGATTTAACTCTCACTTTGAATGCCAAAAACAAGCATCTTCTAAGATGTGTGACTGGGGAACTAAATCCTGGTCGAGTTTCAGCAGTCATGGGCCCATCTGGGGCTGGTAAAACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCATACGACTGGCTTAGTTCTTATAAATGGCAAGGTTGAATCTATCCGGTCATACAAGAAGATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTAGAAGAGAATCTGTGGTTCAGTGCCAGATGCAGACTTTCAGCTGATCTACCGAAAGCAGAGAAGGTTCTAGTAGTTGAAAGAGTTATTGAGTCGTTAGGTCTGCAAGCAATCCGAGATTCTCTGGTTGGAACGGTGGAGAGGCGTGGAATCTCTGGAGGTCAAAGAAAACGAGTGAATGTAGGACTGGAAATGGTTATGGAACCTTCACTCCTGATTTTAGATGAACCAACATCTGGTTTAGATAGTTCATCTTCTCAGTTATTGCTTAGAGCACTTAGACGAGAGGCTCTAGAGGGTGTAAATATATGCATGGTCCTTCACCAACCAAGTTACACACTGTTCAGGATGTTTGATGATTTTATACTACTCGCTAAAGGTGGTCTTATAGTGTATCTTGGACCAGTGAAGAAAGTTGAAGAGTATTTTTCCAGCTTGGGAATTGTTGTTCCTGATCGTGTTAATCCTCCAGATTATTACATTGACATTTTAGAAGGGATAGTAAAACCAAGCTCAAGCACAGCAGTAAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTATACTGTTCCTCTGGACCTGCTTCAGGGTGTTGAAGGAATGGAAGGCGCAAGTAGTGAAAGTTCCACCCATGGGGCAGCTACTCCAGCAGCAGAAACTGAAGATCCGTCTTTAGCTGGGGAAATTTGGCAGGATGTAAAAGTCCATGTTGAGAAGAAGAAAGACTACCTTCGATCTACTTTCTTTACATCAAATGATTTATCAAATCGGGTAACCCCTGGAGTCTTCCAACAATACAGATACTTTCTTGGAAGGTCTGGTAAACAGCGGCTACGAGAAGCTAGAACACAGGCTGTAGATTTTCTAATTTTGTTACTAGCTGGAATATGCTTAGGAACACTTGCCAAAGTGAGTGATGAAACGTTTGGAGCAAATGGTTACACATATACTGTTATAGCAGTATCACTCCTATGCAAGATCGCAGCTCTGAGAACATTTTCACTGGATAAGTTGCACTACTGGAGAGAGAGTGCATCTGGCATGAGTAGCCTGGCTTACTTTCTTGCAAAGGATACAGTTGATCATTTTAATACACTCATAAAGCCTGTGGTCTATCTCTCAATGTTCTATTTCTTCAACAATCCGAGATCCTCTGTTGTAGATAACTACTTTGTTTTGGTGTGCTTGGTGTACTGTGTCACTGGCATAGCTTATATATTGGCGATCTCACTTGAACCTGGTCCTGCCCAATTGTGGTCGGTGTTACTTCCAGTAGTTTTGACACTTATAGCAACCAGTGATAGTGTAGCTGAGAGCTCATTCATGAGCAAGGTAGCTGAAGTTTGCTATGCAAAGTGGGCTCTAGAAGCATTTGTGATATCAAACGCTAAAAGATATGCTGGGGTTTGGTTAATAACCCGATGTGGTGCACTAAATGTTCGTGGCTATGATCTCAACAACTGGTATCAATGTCTTATTCTTCTTGTGGTAACCGGAGTGCTTAGTCGCATTGTGGCATTCTTTTGTATGATGACTCTCCAGAAGAAATAA | 3297 | 0.4225 | MNDIIRRVALAFIVALSCYSEQVSCQSTNQSQAAVQLVAQAVYGSMSSFTGVFKDEIKKNLGFCIVDVDADWDGAFNFTNDLTFLTSCSQSLKGDISQRICTAAEIKLYASGFDIKSKSQSNNLQPNKNCNLSVWLNGCEPGWGCIAAEKVQLNNTKDIPDRSTDCQPCCPGFFCPRGITCMIPCPLGSYCPRGQLNQATGICEPYHYQLPAGKTDHSCGGADVWADISSSWDVFCSSGSYCPSSIQKNPCTQGHYCRTGSTHQESCFKLASCKPQSANQNITAYGVMVFAGLSFLLIIIYNCSDQVLATRERRIAKSRERAAASVRETQAREKWKSAKDIAKKHAVGLQSSLSRTFSRRKSMKGDLKAFGSKSASETPFPPAPPAGAGKSSAASKGKKDKTSLTKMIQNIEEDPDSQEGFHVEIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKAMQEQNKNLTFSGVISMASDIEIRKRPTIQVAFKDLTLTLNAKNKHLLRCVTGELNPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGLVLINGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKAEKVLVVERVIESLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLIVYLGPVKKVEEYFSSLGIVVPDRVNPPDYYIDILEGIVKPSSSTAVNYKQLPVRWMLHNGYTVPLDLLQGVEGMEGASSESSTHGAATPAAETEDPSLAGEIWQDVKVHVEKKKDYLRSTFFTSNDLSNRVTPGVFQQYRYFLGRSGKQRLREARTQAVDFLILLLAGICLGTLAKVSDETFGANGYTYTVIAVSLLCKIAALRTFSLDKLHYWRESASGMSSLAYFLAKDTVDHFNTLIKPVVYLSMFYFFNNPRSSVVDNYFVLVCLVYCVTGIAYILAISLEPGPAQLWSVLLPVVLTLIATSDSVAESSFMSKVAEVCYAKWALEAFVISNAKRYAGVWLITRCGALNVRGYDLNNWYQCLILLVVTGVLSRIVAFFCMMTLQKK | 1098 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele30g1142 | 1098 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 489 | 731 | IPR003439 | GO:0005524 | |
Lele30g1142 | 1098 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 28 | 238 | 1086 | - | - | |
Lele30g1142 | 1098 | Pfam | ABC-2 type transporter | 687 | 1098 | IPR043926 | GO:0140359 | |
Lele30g1142 | 1098 | Pfam | ABC transporter | 509 | 658 | IPR003439 | GO:0005524 | |
Lele30g1142 | 1098 | Gene3D | - | 478 | 726 | IPR027417 | - | |
Lele30g1142 | 1098 | CDD | ABCG_EPDR | 487 | 713 | - | - | |
Lele30g1142 | 1098 | FunFam | ABC transporter G family member 24 | 483 | 725 | - | - | |
Lele30g1142 | 1098 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | - | - | |
Lele30g1142 | 1098 | MobiDBLite | consensus disorder prediction | 319 | 340 | - | - | |
Lele30g1142 | 1098 | ProSitePatterns | ABC transporters family signature. | 630 | 644 | IPR017871 | GO:0005524|GO:0016887 | |
Lele30g1142 | 1098 | MobiDBLite | consensus disorder prediction | 785 | 804 | - | - | |
Lele30g1142 | 1098 | SMART | AAA_5 | 515 | 716 | IPR003593 | - | |
Lele30g1142 | 1098 | MobiDBLite | consensus disorder prediction | 352 | 403 | - | - | |
Lele30g1142 | 1098 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 490 | 727 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele30g1142 | Lele-ChrLele30 | 14370301 | 14376052 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele30g1142 | 516 | 719 | Calmodulin-binding Proteins | AT2G36910 | 27.803 | 1.22e-10 | 63.9 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele30g1142 | 30 | 14370301 | 14376052 | Lele09g1145 | 09 | 20565693 | 20567824 | CCT | |
Lele30g1142 | 30 | 14370301 | 14376052 | Lele10g1115 | 10 | 22526215 | 22531594 | CCT | |
Lele30g1142 | 30 | 14370301 | 14376052 | Lele11g1148 | 11 | 18753950 | 18758529 | CCT | |
Lele30g1142 | 30 | 14370301 | 14376052 | Lele12g0176 | 12 | 1359929 | 1363476 | CCT | |
Lele30g1142 | 30 | 14370301 | 14376052 | Lele31g1276 | 31 | 18922675 | 18928400 | hybridization | |
Lele30g1142 | 30 | 14370301 | 14376052 | Lele32g0256 | 32 | 1588735 | 1594504 | hybridization |