Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1128 ATGCACTCACCACTACTAATATATTATATCATGGCCAAGTACAGAAACAACAACAACAACAAGAAAGGTGGGGTGGTGAAGCTAAAGATTGTAATTGAAAAGCTGCAGAAAAGTCTGTTACTTGGAAAGAGATCGTCAAGTTCTTATGATGACGTACCAGAAGATGTGAAAGAAGGCCATTTTGCAGTGATAGCTGAAGACGGTGAGGGACCAAAGAGATTTGTGGTACCACTAAGATGTTTGACCCACCCTATGTTCTTGAGACTATTGGAGCAAGCGGCCGAAGAGTACGGGTTTGCTCAGGAAGGTGCAATTAGTATTCCTTGCAGGCCCAGTGAGCTTGAGAGCATATTGTCTGAGCCATGGCATGAAGAAGAAGGAGAAGACTCAGAAAATTTTGGACTTAGCTGCAAGTCTGTAATTCTCGTCAAGCCATGCTTCAAAGCTCCTGCAGATGATGATACCAACATGAAGAAACGGTTTTTGCAAGTCTAA 495 0.4283 MHSPLLIYYIMAKYRNNNNNKKGGVVKLKIVIEKLQKSLLLGKRSSSSYDDVPEDVKEGHFAVIAEDGEGPKRFVVPLRCLTHPMFLRLLEQAAEEYGFAQEGAISIPCRPSELESILSEPWHEEEGEDSENFGLSCKSVILVKPCFKAPADDDTNMKKRFLQV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1128 164 Pfam Auxin responsive protein 46 119 IPR003676 GO:0009733
Lele30g1128 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 117 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1128 Lele-ChrLele30 14298152 14298646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1128 19 119 Calmodulin-binding Proteins AT4G34750 43.564 2.47e-19 77.8