Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1121 ATGACTGGGAAAGTATTAATCTCCGACTTTAACCTACCTCATTTCACTTCCAAAGAGCAAATTGCTTATTCGCTTCTAGAATTGCCTCTGTTGCACAAGCGTAATTTTACAGACGGTGGCCCTATGGAGCCTGACAGATTAAATTCCCCGACAACATTTGATATGCCGTTGGAGATTTTGGGCCATGAGTTGCAGTTTTCTCAGGATCCTAATTCCAAGCACTTGGGAACTACTGTATGGGACGCGTCACTTGTGTTTGCCAAGTTTCTAGAAAAAAATTGCAGAAAGGGAAAGTTCTCCCCAGCTAAACTTAAAGGAAAACGTGTAATTGAACTTGGAGCTGGTTGTGGAGTTTCTGGATTTGGCATGGCTTTGTTGGGGTGTGATGTTATAGTGACAGACCAAAAGGAGGTCTTGCCAATACTACAGAGAAATGTCGAGCGAAATATTTCAAGGGTCATGCAGAAAAATCCTGATTTATTTGGCTCAATCAAGGTTTCAGAGTTACAGTGGGGGGACAGGAATCACATTAGGGCTGTCGAACCTCCCTTTGATTACATTATTGGCACTGATGTTGTTTATGTAGAGCATTTGTTGGAGCCTCTACTGGAGACGATCGTTGCTTTATCTGGACCTAGGACTACAATTTTGCTGGGCTATGAGATCCGTTCCACCGTTGTCCATGAGCAGATGCTTCAGATGTGGGAAAAAACCTTCGATGTCAAGACTGTTACAAAATCCAAGATGGATGAAACGTTCCAACATCCTAGTATTCAGCTCTTCATCATGGGATCAAAACCTACAGCAGAGCGCCTGGACAACACAAGTTTTGTCTCTGCTGAGAAAGTTGATGGCGTTGAAACAAGTAGGGGAGACAAAATTAGTGAGGAAAATGTTGCCGAAGAAAACGGGTCTGATAATGCAGAAGAAAAAGTTGAGACATTCCCCCCGAACACAAAACTCAGTGACTGGGAAGCCAGGAGATATGGCTCTATGGCTGCGAGGATGTTGCGAGACGTAAAAATAACATGA 1032 0.4341 MTGKVLISDFNLPHFTSKEQIAYSLLELPLLHKRNFTDGGPMEPDRLNSPTTFDMPLEILGHELQFSQDPNSKHLGTTVWDASLVFAKFLEKNCRKGKFSPAKLKGKRVIELGAGCGVSGFGMALLGCDVIVTDQKEVLPILQRNVERNISRVMQKNPDLFGSIKVSELQWGDRNHIRAVEPPFDYIIGTDVVYVEHLLEPLLETIVALSGPRTTILLGYEIRSTVVHEQMLQMWEKTFDVKTVTKSKMDETFQHPSIQLFIMGSKPTAERLDNTSFVSAEKVDGVETSRGDKISEENVAEENGSDNAEEKVETFPPNTKLSDWEARRYGSMAARMLRDVKIT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1121 343 Gene3D Vaccinia Virus protein VP39 57 270 IPR029063 -
Lele30g1121 343 CDD AdoMet_MTases 108 222 - -
Lele30g1121 343 Pfam Lysine methyltransferase 62 226 IPR019410 -
Lele30g1121 343 MobiDBLite consensus disorder prediction 288 309 - -
Lele30g1121 343 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 42 254 IPR019410 -
Lele30g1121 343 MobiDBLite consensus disorder prediction 288 316 - -
Lele30g1121 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 102 224 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1121 Lele-ChrLele30 14245188 14248647 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1121 30 14245188 14248647 Lele09g1135 09 20486156 20487804 CCT
Lele30g1121 30 14245188 14248647 Lele10g1107 10 22453780 22455430 CCT
Lele30g1121 30 14245188 14248647 Lele11g1137 11 18661328 18662962 CCT
Lele30g1121 30 14245188 14248647 Lele12g0185 12 1445416 1447070 CCT
Lele30g1121 30 14245188 14248647 Lele31g1258 31 18800243 18803835 hybridization
Lele30g1121 30 14245188 14248647 Lele32g0272 32 1694607 1697321 hybridization