Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1117 ATGGCGGAACAGAAGATTAGACCCACCAAGAGCCGGGTTCTCTATGTTACGATGAAGCTTCTGCACAGACACTCCAGGCCACAACAAGAACGAAGTTGCTTCCGCACTTGTTACAAATGGCTTCTCTGGTTTTCATTTTCCCTCTACTTTTTCGCTTCCTATCTCATCAGCAGTGATTCCCGCCCTCAACTCAGCTCTCTCCGCACAACCCATGTCTCCAACCCCGAATCCGCTTTTCTCTCTCGTGCCCTTTTCGAGGCCTCTCACATGGCTCCCCTGAAACCTCAAACCTCTCCGGGTGTATTGAAGGATATGAAGATTTTTGTGTACGATTTGCCTCCGAAATATAACACCGATTGGCTCTCCAACGAGAGGTGCGGCAGTCATTTGTTTGCTTCCGAAGTCGCCTTTCACAGAGCCCTGTTGACGAGCGACGTCCGCACATTTGACCCATATGAAGCTGACTTCTTCTTCGTGCCCGTTTACGTCTCCTGCAACTTCAGTACCGTCAATGGCTTCCCGGCGATCGGTTACGCGGGCTCACTCATCGCTTCCGCCGTACGACTCATCTCCTCCGAATACCAGTTCTGGAATCGAAGCGGGGGGTCCGACCACGTGTTCGTCGCTTCGCACGACTTCGGGGCCTGTTTTCACACCCTGGAGGACGCGGCGATTGCGGACGGGATACCAGAAATCTTGAAGAATTCGGTTATATTACAGACATTCGGTGTTCAATACAAGCACCCGTGCCAAGACGTTGAGAATGTGGTCATACCACCCTACGTGTCGCCGGAAAGCTTGCATAACACGATGGAGAAAGCTCCGGTGGGCGGAGGGCGTGACATTTGGGTGTTCTTCAGGGGGAAGATGGAGGTCCATCCGAAGAACGTCAGCGGACGGTTTTACAGCAAGCGGGTGCGGACGGCGATATGGCGGAGATACAACGGCGACCGGAGGTTTTACCTGCGGAGGCACAGGTTTGCCGGGTACCAGTCAGAGATAGCTCGGTCAGTGTTCTGCCTGTGCCCGCTGGGCTGGGCCCCGTGGAGCCCTCGGCTGGTGGAATCAGTTGCATTGGGCTGCGTGCCGGTGATAATAGCGGACGGGATCCGGCTGCCGTTCGGATCGGCGGTGAGTTGGGGGGAGATATCGGTGACCGTGGCTGAGAAGGACGTGGGGAGGCTGGGGGAGATATTGGAGGAGGTGGCGGCGACCAATCTGAGCGCGATACAGATGAAGCTGTGGGACCCTCGGACGAAGCGGGCCCTGCTGTTCAACAGTGAGATGGAAGAAGGTGATGCCACGTGGCAGGCGCTGGAGGCGCTGAGCTCGAAGCTGGACAGGTCCTACAGGAGGTCAAGGTTTTCGGGCCAATTGGAGAGGTACACGTAA 1392 0.5589 MAEQKIRPTKSRVLYVTMKLLHRHSRPQQERSCFRTCYKWLLWFSFSLYFFASYLISSDSRPQLSSLRTTHVSNPESAFLSRALFEASHMAPLKPQTSPGVLKDMKIFVYDLPPKYNTDWLSNERCGSHLFASEVAFHRALLTSDVRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGYAGSLIASAVRLISSEYQFWNRSGGSDHVFVASHDFGACFHTLEDAAIADGIPEILKNSVILQTFGVQYKHPCQDVENVVIPPYVSPESLHNTMEKAPVGGGRDIWVFFRGKMEVHPKNVSGRFYSKRVRTAIWRRYNGDRRFYLRRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFGSAVSWGEISVTVAEKDVGRLGEILEEVAATNLSAIQMKLWDPRTKRALLFNSEMEEGDATWQALEALSSKLDRSYRRSRFSGQLERYT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1117 463 Pfam Exostosin family 103 401 IPR040911 -
Lele30g1117 463 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 78 419 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1117 Lele-ChrLele30 14221899 14223667 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1131 11 18624400 18625554 Lele30g1117 30 14221899 14223667 CCT
Lele12g0190 12 1487196 1488347 Lele30g1117 30 14221899 14223667 CCT
Lele30g1117 30 14221899 14223667 Lele31g1253 31 18774527 18776291 hybridization
Lele30g1117 30 14221899 14223667 Lele32g0277 32 1723107 1724876 hybridization