Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1068 ATGGAATTCGAGAATGGATCATCTTCTCCATGCTCAACACGGAACCCTAATTCAGCTCCTGCATCTTACAAAAGGAAAGCAGGAAGAAAGAAATTTCAGGAGACTCGACATCCGCTCTTTCGAGGTGTCCGGCGAAGGAACGGTAACCGGTGGGTTTGTGAAGTCCGGGAACCAAACAAGAAGTCCAAGATTTGGCTCGGCACTTATCCTAATCCAGAAATGGCGGCTAGGGCACATGATGTGGCTGCCCTAGCTCTCCGAGGTAGCTCGGCTGCTCTCAATTTCCCTGACTCGGTTCTACTCCTCCCGGCCACCACCTCATCCTCCGTCCAAGACATCAGAGCAGCCGCGGCCGAAGCCGCCCGCGCTTTCAGACCTACCGCCTCTTCTTCCTCAGTTGAAGTAGATAAGGAAAAGAACGACGAAGGTGATGACTGTAGAAGGATGTTCTTCGACGAGGAGGCATTGTATAACATGCCGAGTCTGTTAGATCACATGGCCGAGGGTTTACTTCTCAGCCCTCCTTCTATCTGCTGGACGACCTTAGGTTTAGGTTTCGACGATGAATCGACTTGTCATCCAATAGACTTGACTTTATGGCGACACGACTGA 612 0.5114 MEFENGSSSPCSTRNPNSAPASYKRKAGRKKFQETRHPLFRGVRRRNGNRWVCEVREPNKKSKIWLGTYPNPEMAARAHDVAALALRGSSAALNFPDSVLLLPATTSSSVQDIRAAAAEAARAFRPTASSSSVEVDKEKNDEGDDCRRMFFDEEALYNMPSLLDHMAEGLLLSPPSICWTTLGLGFDDESTCHPIDLTLWRHD 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1068 203 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Lele30g1068 203 MobiDBLite consensus disorder prediction 1 33 - -
Lele30g1068 203 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Lele30g1068 203 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 17 200 IPR045277 GO:0003700
Lele30g1068 203 SUPERFAMILY DNA-binding domain 39 98 IPR016177 GO:0003677
Lele30g1068 203 Pfam AP2 domain 38 88 IPR001471 GO:0003700|GO:0006355
Lele30g1068 203 MobiDBLite consensus disorder prediction 1 20 - -
Lele30g1068 203 PRINTS Ethylene responsive element binding protein signature 78 98 IPR001471 GO:0003700|GO:0006355
Lele30g1068 203 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Lele30g1068 203 CDD AP2 51 98 IPR001471 GO:0003700|GO:0006355
Lele30g1068 203 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1068 Lele-ChrLele30 13920248 13920859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1068 8 203 AP2-EREBP Transcription Factor Family AT5G51990 45.755 4.18e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele30g1068 AP2 2.9e-13 CL0081