Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1064 ATGTTCCGATTTGAGTGTCTGCTAAGGGCGGAGATGAAGGTGATTGCTGCTTATTTGCTGGCAGTGTTGGGAGGGAACACATCCCCTTCAGCTGATGATATAAAGAATATTCTTGCCTCAGTTGGGGCTGAGGCTGATGATGATAGAATTGAGCTTCTCTTAAAGGAAATTGATGGCAAAGATATTACTGAACTAATTGCTTCTGGAAGAGAAAAGCTGGCTGCAGTTCCAGGCGGTGGAGGTGCAGTTGCTGCTGTTGCTGCACCCGCAGGTGGAGCTGCAGCTGGCGGAGCCGCACCTGCTGCAGAGGCAAAGGAGGAAAAGAAGGTGGAAGAGAAAGAGGAGTCTGATGATGACATGGGTTTCAGCTTATTCGACTAA 381 0.4882 MFRFECLLRAEMKVIAAYLLAVLGGNTSPSADDIKNILASVGAEADDDRIELLLKEIDGKDITELIASGREKLAAVPGGGGAVAAVAAPAGGAAAGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1064 126 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 12 126 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele30g1064 126 Gene3D - 11 70 IPR038716 -
Lele30g1064 126 CDD Ribosomal_P2 12 126 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele30g1064 126 FunFam 60S acidic ribosomal protein P2 9 70 - -
Lele30g1064 126 Hamap 50S ribosomal protein L12 [rpl12]. 13 126 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele30g1064 126 MobiDBLite consensus disorder prediction 102 116 - -
Lele30g1064 126 MobiDBLite consensus disorder prediction 93 126 - -
Lele30g1064 126 Pfam 60s Acidic ribosomal protein 28 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1064 Lele-ChrLele30 13893804 13895184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1064 12 126 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 66.087 1.00e-32 109