Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1058 ATGTCATGGTTTGCTCTGTCTACAGATTCTGAATTGGGATGTGAATGCTCTCCCATGTATACTATATATAATGCTTCTGCAGCGACCAAGTTACATGAGATTAATTTCCTTCTACAGACTGAAGCAAGTTCCACTATTATTAAAGGCTTTGGTCAATTCTTACCTTGGGAGTGCCTCCATGAACTAAAATCGCTATATCTCTCGTCGGGATTGGACCGACTACGATCAAAGAAGATGGCGGAAGAACATAGATGCCAAGCTCCGCAACTCTGCGCCAACAACTGCGGCTTCTTCGGCAGTCCTGCGACGCAGAACCTATGTTCCAAATGCTACAGAGATTTGCAGCTGAAGGAGCAACAGTCCTCCTCGGCCAAGCTGGTTCTCAATCAATCCATAGTCCCTCAGCCGTCCACGGCGGAGAAATCGGAATCGTCTTCGTCGTTGCTGGAACCGGTTGCCGATATTTCGTCTCCGGTTGTTGCTGCGGTTGATCCGCCGCTTCCGGCGGAGGAGCCGAAGAGTGCTTCAGCGACTCAGCCGAATAGGTGCATGACGTGCAGGCGGCGCGTGGGGCTCACGGGGTTCAAGTGTCGGTGCGGGTTGACGTACTGCGGGGCCCACCGCTACCCGGAACAGCACGAGTGTGAGTTCGACTTCAAGACGATGGGCCGGGAGCAGATCGCGAAGGCCAATCCAATAGTGAAGGCCGATAAACTCGAAAAGATCTAA 729 0.5213 MSWFALSTDSELGCECSPMYTIYNASAATKLHEINFLLQTEASSTIIKGFGQFLPWECLHELKSLYLSSGLDRLRSKKMAEEHRCQAPQLCANNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKLVLNQSIVPQPSTAEKSESSSSLLEPVADISSPVVAAVDPPLPAEEPKSASATQPNRCMTCRRRVGLTGFKCRCGLTYCGAHRYPEQHECEFDFKTMGREQIAKANPIVKADKLEKI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1058 242 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 90 136 - -
Lele30g1058 242 SMART A20_3 88 112 IPR002653 GO:0003677|GO:0008270
Lele30g1058 242 PANTHER AN1-TYPE ZINC FINGER PROTEIN 87 242 - -
Lele30g1058 242 Gene3D - 78 147 - -
Lele30g1058 242 Pfam A20-like zinc finger 89 112 IPR002653 GO:0003677|GO:0008270
Lele30g1058 242 SUPERFAMILY AN1-like Zinc finger 169 237 IPR035896 -
Lele30g1058 242 Gene3D - 159 238 IPR035896 -
Lele30g1058 242 ProSiteProfiles Zinc finger A20-type profile. 85 119 IPR002653 GO:0003677|GO:0008270
Lele30g1058 242 FunFam Zinc finger AN1-type containing 6 159 238 - -
Lele30g1058 242 Pfam AN1-like Zinc finger 183 219 IPR000058 GO:0008270
Lele30g1058 242 ProSiteProfiles Zinc finger AN1-type profile. 177 223 IPR000058 GO:0008270
Lele30g1058 242 SMART AN1_Zf_4 183 220 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1058 Lele-ChrLele30 13842090 13845291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1058 79 242 C2H2 Transcription Factor Family AT3G52800 53.757 1.56e-47 153