Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1051 ATGTTTGACATGGAATATGCAAGATGGTTAGAGGAAGACCACCGGCACATGACGGAGTTGCGGGCGGCGCTTCAGGCGGAGTTATCGGACAGCGAGTTAAGAATAATGGTTGACGGATATCTGTCGCATTACGATGAGATCTTCAGCCTGAAAGGAGTCGCTGCAAAATCAGACGTGTTTCATCTTATTACTGGCATGTGGACTTCTCCTGCTGAACGCTGCTTCCTCTGGATGGGTGGTTTCAGACCCTCTGAACTCATCACGATGTTGATACAGCAGTTGGAGCCGTTGGCTGAGCAGCAGATTATGGGAATGTATGGCCTCAGACATTCCTCACAGCAAGCTGAAGAGGCTCTCTCTCAAGGCCATGAGCAACTCCAGCAGTCCCTCGTCGACACCATCGCCGGCGGCCCCGTCGGCCATGGCGTGCAACAGATGGTTATCGCCATGAGCAAGCTCTCCAATCTTGAAGGATTCGTCCGCCAGGCGGATAACTTGAGGCAGCAGACACTGCAACAGTTATGTAGATTGCTGACAATTCGGCAAGCAGCGAGATGCTTCCTTGTCATGGGAGAGTATTATGGTCGCCTTCGTGCTCTTAGTTCTCTCTGGGCTTCAAGACCTCGAGAGTAA 633 0.5182 MFDMEYARWLEEDHRHMTELRAALQAELSDSELRIMVDGYLSHYDEIFSLKGVAAKSDVFHLITGMWTSPAERCFLWMGGFRPSELITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGHEQLQQSLVDTIAGGPVGHGVQQMVIAMSKLSNLEGFVRQADNLRQQTLQQLCRLLTIRQAARCFLVMGEYYGRLRALSSLWASRPRE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1051 210 Pfam Seed dormancy control 16 91 IPR025422 GO:0006351|GO:0043565
Lele30g1051 210 PANTHER TRANSCRIPTION FACTOR TGA9 1 210 - -
Lele30g1051 210 ProSiteProfiles DOG1 domain profile. 1 207 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1051 Lele-ChrLele30 13794517 13796815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1051 1 210 bZIP Transcription Factor Family AT1G08320 72.381 4.90e-118 338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1051 30 13794517 13796815 Lele11g1059 11 17872254 17875950 CCT
Lele30g1051 30 13794517 13796815 Lele12g0257 12 2238186 2238908 CCT
Lele30g1051 30 13794517 13796815 Lele31g1186 31 18299795 18305858 hybridization
Lele30g1051 30 13794517 13796815 Lele32g0342 32 2141507 2152390 hybridization