Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1018 ATGTCTTCCCACAAGAGAACTTTTCTCAGAATACTCCTCACTGCAAATGGAAGCTGTGGCTGTGGCAGGCCCAAGACCACGGACGTCTTCGAGCCCCAGCCCAGGCACCCTAACCGTAACCCAATCGGCAGCTTCACATCTTCCACCCCCACCTCCGGTGACCGAAATTGCTCACATTCTGTCGACAATGACTACGGAGATTTCACCTTCACCACCGTGTCGGAAGCCGAGACGGAGGCTTGGAGGAGCTGGAAGAATGTGAGTAATTACATGTTGCTGAAGCAGAGTCCGATCGTGGACAGCGAGGCGGTGGAGAAGGAGTCGGAGGATCCGTACAAGGATTTCCGGCACTCGATGCTGCAGATGATATTCGAGAAGGAGATGTGCTCGGAATCTGATCTGGAGGAGCTGCTGGAAGCGTTCCTGCAGCTGAACTCGCCCAGACAGCACGACGTGATCGTGAGGGCCTTCAAGGAAATCTGCCAAGATGCGTTCCCCCCCAGTGATAACGTTAAGAAGAAGACGAACAAGAGCAAGGGGATTAGTTGTTATGGTCACGTAAGGAGTCAGCCATTGGCACGTGCGTAG 588 0.5391 MSSHKRTFLRILLTANGSCGCGRPKTTDVFEPQPRHPNRNPIGSFTSSTPTSGDRNCSHSVDNDYGDFTFTTVSEAETEAWRSWKNVSNYMLLKQSPIVDSEAVEKESEDPYKDFRHSMLQMIFEKEMCSESDLEELLEAFLQLNSPRQHDVIVRAFKEICQDAFPPSDNVKKKTNKSKGISCYGHVRSQPLARA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1018 195 Pfam Transcriptional repressor, ovate 108 163 IPR006458 -
Lele30g1018 195 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 103 161 IPR006458 -
Lele30g1018 195 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 64 164 IPR038933 GO:0045892
Lele30g1018 195 MobiDBLite consensus disorder prediction 39 56 - -
Lele30g1018 195 MobiDBLite consensus disorder prediction 24 56 - -
Lele30g1018 195 ProSiteProfiles OVATE domain profile. 104 163 IPR006458 -
Lele30g1018 195 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1018 Lele-ChrLele30 13610395 13610982 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele30g1018 Ovate 6.3e-22 No_clan