Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1006 ATGGGGTTGTTGTTGAAAGAAGCCTTGAAGACTATGTGCGGCCGGAATCAATGGTCTTATGCTGTGTTCTGGAAGATCGGCTGTCACAATCCTAAGCTGTTAATATGGGAAGAATGCTATTATGAACCGTTGCCTTGTCCCTTTCCTCCAAACAATGATAGAACTGGGGCATCTAACTTGTCCTTCGGAGTTGTGGAAGGCGATGGAGTATGTTCCTTGATTAACAGAATGATGGTGAATAATTCAGTCAATATTGCTGGAGAAGGGATAATTGGACGGGCAGCGTTCACAGGAAATCATCAATGGATTCTTTTGAACAATTTTACTAGAGCTGCATATCCACCAGAGGTATACAATGAGGTGCATCATCAATTTTTGGCTGGAATAAAGACCATAGTGATTATTCCTGTGCATCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTGGCTATAATGGAGAATGTTGGATTTGTGAATGATGTAAGGAGTTTAATCTTTCACTTGGGATGTGTTCCTGGTGTTCTTCTATCTGAAGATTATTCTTCAAAAGTTTCTGCTCAAGGTCTTGGTGCAACTGTTACTGTTGGGGTACCTGTGTCAGTAGATCTGCCAGTTACCTTAGATTGCAGCCCCTCTGTGGCTAGTGGCTCTAACCAACAAAGCAATTCATCTCACACTTCAAACTCCGTTGTTCCCCAATCTCTACCCCACAGGGAAGAGATAAATAATGACCAGGTTTCTGTATTGACACATCAAACCCCTAACCTGACTCAGATGTTGTCTGACTACCATGATAATCTCTGCCAACCTAAGGCAATTCCATTATCAAAACCAAACTTTACTGGCCTATCAGATAATAGAGTTGTGGAGGCACAAGTGATACCTTCAAATCTTAAATCATGTCCTCAACAACCTGCATTCAATGAATTGAATGAGGTTGGCCAATCAAGTCTGAGTGACTACAGCATGAAGTTTAATGAACAACAAACTTTATCTGGTAGTGGGAGTCAGAATTACGTCAATTCTCTTATAAATGCATCAAGAAATTTTAGCATGACTCAAATGAAGACAAACAGAGGCCATATGCCTGACCATAGTCAAAATTCTGTTAGTACTCCATTACTTGGAGGAATCCCGATTCATCATGGAATGAGTAACCTGTTGAGGTCAAGTTTTATTAACACCTCTGTTTCAGAACCTCCCAAAGTTGGTGCTGCTGATTTTTCTGGAACACATAAAGTTGGGACTGGACTTCAAAATGATGATTCAACTAAAGTGGGGGCTTTTACTTTCCCTTATGTTACAAATCATTTAGATGCTTGTCACAGGCCTCTGGAAAGCTCTGATCAGAAGAATCTTCCCCTTGATTTAAAGTGTGCTCGTGACAAGTTGGGTCCAAATGATCTAATGATAGATGGTGATTTGTTTCAGGCACTTGAGATCCCATCTATTCATCTTGAGGAGCATGTGCCTATGAGTGATCAAATTATGGGTTTCGGCAATGGTTCCCCCAATAATGATGTTACAAGTCAATCTTTCACAAAACAAGAAGCTTATGCTCAATCTTCATCAGGAGATGACCTATTTGATGTTTTAGGTGTGGATTTTAAAAACAAAACACTGAATGAGAACTGGAATAAATTGCTTTCTGATGAAACAGATGGTAATGTGAGAGTCCTGGATAAGAAGGCAGCATTTATGAATATGCAGAGCTTAGACGCTGATTGCTGTTCAGTTAATGAGACAGTATCAGATAGTGGCATTTTCTCTGGGAGGGGCACTGATCACCTTTTGGATGCTGTGGTCTCAAGAGCTCAATCTGCTGTGAAACAGGATTCTGATGGCATGTCTTGCAGGACAACCGTGACTAGGATCAGCAGTGCCTCTGTTCCCTCTTCTTCCCACAAGCAGGTTATGTCAGATCATGCCCTTGGTGGATTGTTGAACTTTCCCAAGACTGAGGGTAAATTAAGTGCAGAAACTTGTTCTCTTCGGTCTGGTTGTCACAAGGATGATGCTGGAAACTGTTCTCAAACTACTTCCACTTATGGGTCTCAACTCAGTTCATGGGTTGAGAATGTTAGCAATGTGAAGCGCGAAAACAGTGTTTCAACTGGATACTCTAAGCGACCAGATGAAGTTGGCAAATCAAATCGCAAAAGGCTTAAACCTGGAGAGAATCCAAGACCTCGACCTAAAGATCGCCAAATGATTCAAGACCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGCGCAAAATGTAGCATTGATGCGCTTCTTGAACGAACCATAAAGCACATGCTTTTCTTGCAAAGTGTAACAAAGCATGCCGACAAGCTGAAACAAACAGGGAATTCCAAGATTATTAATAAGGAAGGTGGGCTGCTTCTAAAAGATAATTTTGAAGGAGGGGCTACATGGGCATACGAGGTTGGCTCACAATCCATGGTTTGCCCTATCATAGTTGAGGATCTTAATCCTCCTCGTCAGATGTTAGTGGAGATGCTTTGTGAAGAACGGGGTTTCTTTCTGGAGATAGCTGACTTGATCAGGGGAATGGGTTTGACCATTTTAAAGGGGGTAATGGAAGCTCAAAATGACAAGATCTGGGCACGCTTTGCTGTGGAGGCGAATCGGGATGTGACAAGGATGGAAATATTTATGTCACTGGTTCATCTTCTGGAACAAACAGCTAAGGGTGGTGCAGCAGCATCTAAACCGAACGAAATTAACATGATGGTTTATCACTCCTTCCCACAACCTACTCAGATACCAGCAACTGGGATACCTGCGAGTCTGGTGGATGTGTTTAGTTAG 2820 0.4206 MGLLLKEALKTMCGRNQWSYAVFWKIGCHNPKLLIWEECYYEPLPCPFPPNNDRTGASNLSFGVVEGDGVCSLINRMMVNNSVNIAGEGIIGRAAFTGNHQWILLNNFTRAAYPPEVYNEVHHQFLAGIKTIVIIPVHPHGVVQLGSFLAIMENVGFVNDVRSLIFHLGCVPGVLLSEDYSSKVSAQGLGATVTVGVPVSVDLPVTLDCSPSVASGSNQQSNSSHTSNSVVPQSLPHREEINNDQVSVLTHQTPNLTQMLSDYHDNLCQPKAIPLSKPNFTGLSDNRVVEAQVIPSNLKSCPQQPAFNELNEVGQSSLSDYSMKFNEQQTLSGSGSQNYVNSLINASRNFSMTQMKTNRGHMPDHSQNSVSTPLLGGIPIHHGMSNLLRSSFINTSVSEPPKVGAADFSGTHKVGTGLQNDDSTKVGAFTFPYVTNHLDACHRPLESSDQKNLPLDLKCARDKLGPNDLMIDGDLFQALEIPSIHLEEHVPMSDQIMGFGNGSPNNDVTSQSFTKQEAYAQSSSGDDLFDVLGVDFKNKTLNENWNKLLSDETDGNVRVLDKKAAFMNMQSLDADCCSVNETVSDSGIFSGRGTDHLLDAVVSRAQSAVKQDSDGMSCRTTVTRISSASVPSSSHKQVMSDHALGGLLNFPKTEGKLSAETCSLRSGCHKDDAGNCSQTTSTYGSQLSSWVENVSNVKRENSVSTGYSKRPDEVGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGNSKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGMGLTILKGVMEAQNDKIWARFAVEANRDVTRMEIFMSLVHLLEQTAKGGAAASKPNEINMMVYHSFPQPTQIPATGIPASLVDVFS 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1006 939 MobiDBLite consensus disorder prediction 712 737 - -
Lele30g1006 939 MobiDBLite consensus disorder prediction 699 737 - -
Lele30g1006 939 CDD bHLH_AtLHW_like 726 795 - -
Lele30g1006 939 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 164 IPR025610 -
Lele30g1006 939 MobiDBLite consensus disorder prediction 212 234 - -
Lele30g1006 939 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 929 IPR043561 GO:0003700|GO:0006355
Lele30g1006 939 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 722 771 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1006 Lele-ChrLele30 13526029 13531348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1006 521 903 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.499 5.75e-119 375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1039 11 17576480 17591225 Lele30g1006 30 13526029 13531348 CCT
Lele09g1039 09 19568285 19571390 Lele30g1006 30 13526029 13531348 CCT
Lele10g0991 10 21275510 21279173 Lele30g1006 30 13526029 13531348 CCT
Lele30g1006 30 13526029 13531348 Lele31g1139 31 18036311 18041910 hybridization
Lele30g1006 30 13526029 13531348 Lele32g0385 32 2386235 2391359 hybridization