Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0996 ATGAGCCACCCGACCCGTGGCGGGATATTTGCATGCACCGTCAAAAGACGTGCACCAAGCTCATGTGGGTTCGTTAGCGAGGTGGGGTTAACACGTCCCGTGATTGACCCTATGGCCCTCGACCCTGACAACGACACGTCGTCACCAATCACAGCACGACGCCGTTTTCTCGTGCTCCGCATCCTCCCGGCGCACGGATTTGATCCCTTGAACTGCACTGTTAATGATACTATGGGTGTCTCTGGGAAGTGGATTAAAGCTTTGGTTGGTTTAAAGAAATCTGAAAAGGCAGAGTCTTCAGATAAGGATGTAAATAGGACTGGAAAAACATGGCACCGAAGGAAACGATCCATAGATGTCAACAATGAAAAACTCCAAAATGAGTTTAATCATGATGCTACTCCTTTTGGAGATGCCCATATCCATTCAGTCACTGATGTCCAACATTCACCTTCCACTTCACAACAAGTACAGGATGCTTCATATAGCCATCAAATTATGAGGGAGGAATGGGCAGCAACACGCATTCAAACGGCATTCCGAGGATTTTTGGCCCGAAGAGCACTACGAGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAGGCACATGTTCGGGCAAGGCGTGTTCGCATAGCATTGGAAAGTCAGTCAGCACAACAGAAACTTCAGCAACAACTTGCAAATGAAGCCCGTGTTCGAGAAATAGAAGATGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTATTGAAGAGACAGGAGGCTGCAGCTAAACGAGAGAGAGCAATGGCATATGCTCTGGCGCATCAGTGGCAGGCCGCATCAAGGCAGCAGGCTGCTTCTTCTGGATTTGAACCAGATAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTGCGTCCTTGGGAGAATCGTTTTCTCGACATTAACACAAGGGATGGGGTAATGGTCTGTGAAAATGGAGCAGTGGAGGGTCAAAATGGAATCAGATCTCAATTAAGATCTGCTAGCAAGAAATCAGTTCTACCAAATTTTAATCCACCAAACCTTACTAGTCAGAAAACTGGGTCATCATTATCTGATGGTGATGACTCTTCTTCACCTAGTAAGTCTGCAGGTTTGCTGGAGGCACCAAAAACACAGACTAAGACAAAATATAATGCAAATGTTGAAATTGAAGAAGCCAACTCAAGACCTGGGCTTGGTTCGAGATCTCATAGTAATCCGAAGGAGAGGGTCACACCAGATGATAAACAGGCAAAAAAACGATTATCTCTGCCTAACAATGCAGGGGGAGGCGCTGGGGCTCAAACCGCTAGAAATCCAGCCAGAACAAATGTGAAGGGAGCAATGAGCACCCAAAAAGCTTTTCGTGACAAACCTAATCTCAATGGAAGAGGGGATGTGAATTCGACAAAAACTGTTCCTCAAAACGCAGAAATGTAA 1539 0.4639 MSHPTRGGIFACTVKRRAPSSCGFVSEVGLTRPVIDPMALDPDNDTSSPITARRRFLVLRILPAHGFDPLNCTVNDTMGVSGKWIKALVGLKKSEKAESSDKDVNRTGKTWHRRKRSIDVNNEKLQNEFNHDATPFGDAHIHSVTDVQHSPSTSQQVQDASYSHQIMREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQAHVRARRVRIALESQSAQQKLQQQLANEARVREIEDGWCDSMGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRQQAASSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVCENGAVEGQNGIRSQLRSASKKSVLPNFNPPNLTSQKTGSSLSDGDDSSSPSKSAGLLEAPKTQTKTKYNANVEIEEANSRPGLGSRSHSNPKERVTPDDKQAKKRLSLPNNAGGGAGAQTARNPARTNVKGAMSTQKAFRDKPNLNGRGDVNSTKTVPQNAEM 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0996 512 MobiDBLite consensus disorder prediction 360 422 - -
Lele30g0996 512 SMART iq_5 191 212 IPR000048 GO:0005515
Lele30g0996 512 SMART iq_5 168 190 IPR000048 GO:0005515
Lele30g0996 512 Pfam IQ calmodulin-binding motif 171 190 IPR000048 GO:0005515
Lele30g0996 512 ProSiteProfiles IQ motif profile. 193 220 IPR000048 GO:0005515
Lele30g0996 512 MobiDBLite consensus disorder prediction 462 483 - -
Lele30g0996 512 MobiDBLite consensus disorder prediction 96 117 - -
Lele30g0996 512 FunFam IQ-domain 11 168 219 - -
Lele30g0996 512 MobiDBLite consensus disorder prediction 496 512 - -
Lele30g0996 512 ProSiteProfiles IQ motif profile. 169 197 IPR000048 GO:0005515
Lele30g0996 512 MobiDBLite consensus disorder prediction 360 512 - -
Lele30g0996 512 MobiDBLite consensus disorder prediction 440 454 - -
Lele30g0996 512 PANTHER IQ-DOMAIN 5-RELATED 78 463 - -
Lele30g0996 512 Gene3D - 169 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0996 Lele-ChrLele30 13427485 13434609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0996 78 497 IQD Protein Family AT3G22190 55.374 1.56e-122 363