Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0984 ATGTACAACGGTATGATGGATCCTGAGATGATCAGAATCGCTCAGGAGCAGATGAGTCGTATGTCACCCGCCGAGTTTGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGTTAATGAGGATGGCCTCAGAAAGCATGAAGAACATGAGGCCTGAAGACTTCAAACTTGCTGCCGAGCAGTTAAAGCATACTCGTCCTGAACAGATGGCTGAGATTGGTGAGAAAATGGCAAATGCAACACCTGAAGAAATTGCAGCTATGCGTGCCCGTGCTGATGCGCAGATTAAATATGAATTAAGTGGAGCTGAGATGTTGAAGAAGAAGGGCAACGAACTCCATAATCAAGGAAAATTCCATGAAGCTATGCAGAAGTATTGTCTTGCGAAGCAAAACGTTAGAGAAATCCCATCCTCCCAAAGTAGAAAGCTTCTTTTAGCATGCTCGCTCAACTTGATGTCTTGTTACCTGAAGACAGGGCAGTATGATGAATGCGTAAAAGAAGGTTCTGAGGTTTTGTCGTATGACCCAAAAAATCTTAAAGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTTGGTATACTAAAGGATTCTGTTAATGATTTGAGCATGGCATATGAAGTTTGCCCAGATGATGATACAGTTGCAAAGCTGTTAAGGGAGACCAAGGAAATGTTGGCAGAGGGTGGTGGCGAGCATGCACCTAGGGGATTGGTAATTGAAGAAATAACTGAAGAAGATCAGAATGTTCCAGCACAAAACGTTGGAAGCTCATATGTGGAGCAAACAGTGGCTCAGCCAAATACTTCCAACGAGTCTTCTAAGAGTTCCAGTACAGTCATCAATGAGAATTTAAAATCAAATATGAAGGGTTTAAATGCACTGAAAAATGATCCTGAATCTATCAGATCATTCCAAAATTTCATTTCAAATGCCGACCCTGCCACTCTCGCTTCTTTGAATGCCGGACAATCCAAAGATGTGTCTCCTGATATGATTAGAACTGCCTCAAACATGATTGGCAAAATGTCACCACAGGAACTTCAAAAAATGCTTGACATGGCTTCCTCGTATCAGGGGGACAATCCATTTTTAAGAGGATCCCCTGATTCTACTATCAACTCTGGATCAATTCCTCCAAATGTGACTCCTGACATGTTTAAAACAGCTTCTGATATGATAAGTACAATGCCACCAGAGGATCTTCAGAAGATGTTTGAAATGGCTTCCTCATTGTCTGGGAAAGCATCTAGTTCATCATCTGCAGCTGTAGACAAGAATGTGAGAAATGCTTCTCAGTCAAACATCTCCTCCTCGAATGCTAGTGGAAGTAATGCTTTTGCTGAATCAAGTTCTTCTCATGATTGGTTTTTAAATATGAGAAATGCTGCTCAGTCTAACTTCCCATCCTCAAGTGCTGATTTGCAAGAACAGATGAGAAACCAGATGAAAGATCCAACTATGCGACAGATGTTTACATCAATGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGCGAACAGTTTGGTGTTAAGCTTTCAAAAGAAGATGCAGCAAAAGCTCAGCAAGCCATGTCATCCTTGTCACCAGAGGACTTGGATAGAATGATGCGATGGGCTGATCGGATTCAAAGAGTAGGTGAAGGTGCGAAGAAGACAAAGAATTGGCTACTAGGAAAACCTGGTGTGATATCGGCAATTGTCATGCTCATTTTAGCAGTAATTCTTCACCGGCTGGGTTTCATTGGTGGCTAG 1764 0.4195 MYNGMMDPEMIRIAQEQMSRMSPAEFARIQQQMMSNPELMRMASESMKNMRPEDFKLAAEQLKHTRPEQMAEIGEKMANATPEEIAAMRARADAQIKYELSGAEMLKKKGNELHNQGKFHEAMQKYCLAKQNVREIPSSQSRKLLLACSLNLMSCYLKTGQYDECVKEGSEVLSYDPKNLKALYRRGQAYKELGILKDSVNDLSMAYEVCPDDDTVAKLLRETKEMLAEGGGEHAPRGLVIEEITEEDQNVPAQNVGSSYVEQTVAQPNTSNESSKSSSTVINENLKSNMKGLNALKNDPESIRSFQNFISNADPATLASLNAGQSKDVSPDMIRTASNMIGKMSPQELQKMLDMASSYQGDNPFLRGSPDSTINSGSIPPNVTPDMFKTASDMISTMPPEDLQKMFEMASSLSGKASSSSSAAVDKNVRNASQSNISSSNASGSNAFAESSSSHDWFLNMRNAAQSNFPSSSADLQEQMRNQMKDPTMRQMFTSMIKNMSPEMMANMGEQFGVKLSKEDAAKAQQAMSSLSPEDLDRMMRWADRIQRVGEGAKKTKNWLLGKPGVISAIVMLILAVILHRLGFIGG 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0984 587 SMART tpr_5 146 179 IPR019734 GO:0005515
Lele30g0984 587 SMART tpr_5 103 136 IPR019734 GO:0005515
Lele30g0984 587 SMART tpr_5 180 213 IPR019734 GO:0005515
Lele30g0984 587 Gene3D Tetratricopeptide repeat domain 90 232 IPR011990 GO:0005515
Lele30g0984 587 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 4 364 - -
Lele30g0984 587 SUPERFAMILY TPR-like 97 225 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0984 Lele-ChrLele30 13354443 13359546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0984 107 229 Calmodulin-binding Proteins AT5G48570 34.109 2.70e-12 67.8