Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0975 ATGGCTATGAATCAATCCCGGGTATCTTGTAGTCCGGTTCTGTTGAAGGTGGGTTTAGGGGTGGTGGCTCTGTGCATCGCCAGCTACATTCTGTGTCCTCCTCTGTACTGGCATTTCATGGAAGGTGTTGCTGCACTGAAGCACTCCTCTTCTACTTGTGCGCCCTGCGTCTGCGATTGCGCTTCTGAACCCGTCCTCTCCATACCCCAAGGGCTTGGCAATGCTTCATTTGGAGATTGTGCAAAGCATGATCCAGAGGTGAATGGAAACACTGAAAAGAACTTTGCGGAGTTGTTGTCAGAAGAGCTAAAATTACGAGAAACTGAAGCTCGGGAAACTCACCGACGTGCGGACATGGCTCTGCTTGAGGCTAAGAAAATTACGTCTCAGTATCAAAAGGAAGCAGACAAGTGCAATTCAGGGATGGAGACATGCGAGGATGCCAGGGAGAAAGCCGAGGCAGCATTAGGGGAACAAAAGAAGTTGACAGTGTTGTGGGAACTGCGGGCTCGTCAGAAAGGATGGAAAGAAGGGGTTTCCAAGTCTAATGCCCAGTCTCAGGGAAAAGTACAGACTTCTTAG 582 0.4966 MAMNQSRVSCSPVLLKVGLGVVALCIASYILCPPLYWHFMEGVAALKHSSSTCAPCVCDCASEPVLSIPQGLGNASFGDCAKHDPEVNGNTEKNFAELLSEELKLRETEARETHRRADMALLEAKKITSQYQKEADKCNSGMETCEDAREKAEAALGEQKKLTVLWELRARQKGWKEGVSKSNAQSQGKVQTS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0975 193 Pfam Protein of unknown function (DUF1068) 14 178 IPR010471 -
Lele30g0975 193 Coils Coil 142 162 - -
Lele30g0975 193 PANTHER EXPRESSED PROTEIN 14 186 - -
Lele30g0975 193 MobiDBLite consensus disorder prediction 178 193 - -
Lele30g0975 193 MobiDBLite consensus disorder prediction 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0975 Lele-ChrLele30 13324735 13326800 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0300 12 2750258 2758835 Lele30g0975 30 13324735 13326800 CCT
Lele30g0975 30 13324735 13326800 Lele31g1115 31 17831767 17833635 hybridization
Lele30g0975 30 13324735 13326800 Lele32g0411 32 2600826 2602888 hybridization