Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0969 ATGGCCAGAGGGAGTGGACTCTCCATTGATTCAGATCCAGCTTCTAGCAGCTTCTTCCTCTCCAATAATCCCATTGTTCTTAAAGACGCCATTCAACCTCCCATGGACTCTTCAATCCCTTTCTTTGAGATGGACTTCTTCTCCAACAACAACAATCTCAGGCCTGCCCCTTCCAACGCCGATTCCTCCACCCCTTCTCATCATCTTCAATTCAAAGTAAACACTGAGATTGCTGTTGTTCGAGCTGAGTTAGAGGAGATGATGATGATGGGAGAGAATCATAATAAGCTGAAAGACATGCTAAATGAGGTTAACACCGATTACAATGCTCTTAATATGCAGATAAACTCTATCGAGTCTCGCAAGGGCAGTGAGTACGCTGAGAAACATGAAAACAACGTGTTTAATGATGCAAGTCCAGAAGAAAAGAAAGAAACTGAGGGTAATAGAGGGAACTTAGTGCAAAGGAAATTCATAGATCTCGGATTAGCTTCAATCAATGAAGGTGATCAGGCAAATAACGTTGAGCATTCGCTTTCTTCCTATGCGAGGAGAAGCAGTGATGGATCAAGATCACCCTTAGAAGTGGAATGTAGCGCCAAAATTGGTTCGGAGAAGAAGGCAATTAACAAAGAAACTAAAATTGAACAAGAAGCAGACAGGATTAATCAAACGTACAGTCCTCCCAAAAACGTTGATGATCAGGTGGAAGCCATTATGAAGAAGGCAAGAGTTGCAATTAAAGCTTTTTCAGAAGCACCAATGATTACCGATGGATGTCAATGGAGAAAATATGGGCAGAAGATGGCCAAAGGGAATCCATGCCCTCGAGCTTATTATCGTTGCACCATGGAGGATCGATCAATCTTGGTAACGACATATGAAGGGAATCATAACCACGCATTACCTCCAACAGCAATGGCGATGGCACAAATGACAGCGGCAGCAGTAAGGACGTCGCTTTCAGGATCAATGTCAAGCAACGATGGCCTAATGAATGGAAGCTTCTTGACAAGGACGACGTTGCTCCCTTGTTCTTCAAGTAACATTGCAACTCTCTCGGCCTCATCTCCATTTCCAACTATTACGTTGGACTTAACTAATCCTCCAACAGCACAAACACAACCTTCTACCCAATTTCAAGTGCCATTGTCAAATGATAATGCCTCTCCCGGTTTAATTCAAGTTTTGGCTCAAGCGCTCTATAGCAACAATCAATCAAGTTTTTCAGGGCTTCAGATGAACAATAATGACCCCTTGCCATTGAGTGCTATTATAGCAGCTAACCCTAACTTCACAAGAGCTTTAACAGCGGCTATTACTTCAATTTCTGCTCTGCCAAAGAATGTTAACAGTGACAATATTCGCAGTCTTACAGCAAGTGGCAATAACACTGATTCAAATTTTGCAGGGAACTAG 1419 0.4264 MARGSGLSIDSDPASSSFFLSNNPIVLKDAIQPPMDSSIPFFEMDFFSNNNNLRPAPSNADSSTPSHHLQFKVNTEIAVVRAELEEMMMMGENHNKLKDMLNEVNTDYNALNMQINSIESRKGSEYAEKHENNVFNDASPEEKKETEGNRGNLVQRKFIDLGLASINEGDQANNVEHSLSSYARRSSDGSRSPLEVECSAKIGSEKKAINKETKIEQEADRINQTYSPPKNVDDQVEAIMKKARVAIKAFSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMEDRSILVTTYEGNHNHALPPTAMAMAQMTAAAVRTSLSGSMSSNDGLMNGSFLTRTTLLPCSSSNIATLSASSPFPTITLDLTNPPTAQTQPSTQFQVPLSNDNASPGLIQVLAQALYSNNQSSFSGLQMNNNDPLPLSAIIAANPNFTRALTAAITSISALPKNVNSDNIRSLTASGNNTDSNFAGN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0969 472 SUPERFAMILY WRKY DNA-binding domain 250 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele30g0969 472 Gene3D WRKY domain 241 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele30g0969 472 SMART WRKY_cls 256 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele30g0969 472 Pfam WRKY DNA -binding domain 258 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele30g0969 472 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 70 445 IPR044810 GO:0003700
Lele30g0969 472 ProSiteProfiles WRKY domain profile. 251 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele30g0969 472 Coils Coil 94 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0969 Lele-ChrLele30 13289305 13291705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0969 72 443 WRKY Transcription Factor Family AT1G62300 40.758 1.08e-75 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele30g0969 WRKY 2.5e-10 CL0274