Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0959 ATGATCTACAGTGACGACGACTTTAGCGACGAGGTTGAGGACGAGGTGGTGGACACGGCGAACGCAGAGGCGAAGCAGAACATGAAGAAGGGCCCGTGGACGGCGGCGGAGGACGCGATTTTAATAGAGTACGTGAACAAGTACGGCGAGGGGAATTGGAATTCCGTGCAGAAGAACTGTGGGTTGACGAGGTGTGGCAAAAGTTGCAGGCTCCGATGGGCCAACCATCTCAGGCCTAATCTCAAGAAAGGTGCTTTCTCTCAGGAAGAAGAACAGCTCATCGTCGAGCTTCACGCCAACCTCGGAAACAAATGGGCTCGCATGGCCTCGCTGTTACCAGGGAGAACTGATAATGAAATAAAGAATTTCTGGAACACGAGAATGAAAAGACGCCAGAGAGCTGGTTTGCCTCTGTATCCTCCAGAACTTCAAGAAGAAGCTTCTCCACATCATCATCTTCACCAAAACCAGCAATACCAAGCACCACCACCACCACCTCACCATTCTCCTTCTTTTTCATTTTCTTCTCTCCTATCTTCTCCCTCCAACAAACGCCATAAGCTCAATGGCCAGCAAAACAATTCTGATTCTGATACAACTTATGACATAAGCTATCATCAACACCCTCAAAACATGGGCCTGCCATTACTATCCTCTCTTTTTCCCAATGGGTTTAATTATTCCGGTGGTACGATGACGGAGCTCTCTTCGACCCAATCGGAAACACCTCCTTCTTCGTCCTACAGTACTGGTGGGTTTCATGGTTTGATGGGAGGTTCCATCATTAATGGTCCTGGTCTTGACTACCATGAGGTTGCAACATTGTCAGCATCATCAACTGAAGTAAACAGTGGGCTCTTGGATGCTGTATTAATGGAGTCTCAAGCCTTTTCTCGCAGTGACAAACGCAAGTGGAAAAGTAACGATTCTTCTGCAGGAAGGAAGTTATCCTTGAAGAGGAAGGGCATTGCAGATGAAGAAGACAAAGGCACTGAGCAATTGGAGCAATTCCAGAGGGACGATTTAAGCTCTTCTCAATTATCAACAGAGAAGAAAGCATCATCATCATCTGTTAGGGATAATGATCCATTGGAGATGAGTTCGATGGACGATGATTTGTTTAGCTTGCTGAACAATTTTCCATCAGAAATGCCATTGCCTGAGTGGTACCGAAGAGGAGAAAGAAAAGCATTGGAAGCTGAAAATCAACAAGAAGCTTCACTGGGCCAACCGGATCAGCAACTTGCTTGGACCCTCGGAACCTGCTGGTCCAACGACTTGCCTAGTAAATGCTAA 1296 0.4684 MIYSDDDFSDEVEDEVVDTANAEAKQNMKKGPWTAAEDAILIEYVNKYGEGNWNSVQKNCGLTRCGKSCRLRWANHLRPNLKKGAFSQEEEQLIVELHANLGNKWARMASLLPGRTDNEIKNFWNTRMKRRQRAGLPLYPPELQEEASPHHHLHQNQQYQAPPPPPHHSPSFSFSSLLSSPSNKRHKLNGQQNNSDSDTTYDISYHQHPQNMGLPLLSSLFPNGFNYSGGTMTELSSTQSETPPSSSYSTGGFHGLMGGSIINGPGLDYHEVATLSASSTEVNSGLLDAVLMESQAFSRSDKRKWKSNDSSAGRKLSLKRKGIADEEDKGTEQLEQFQRDDLSSSQLSTEKKASSSSVRDNDPLEMSSMDDDLFSLLNNFPSEMPLPEWYRRGERKALEAENQQEASLGQPDQQLAWTLGTCWSNDLPSKC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0959 431 CDD SANT 85 126 IPR001005 -
Lele30g0959 431 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 77 IPR017930 -
Lele30g0959 431 FunFam MYB-related transcription factor 29 82 - -
Lele30g0959 431 MobiDBLite consensus disorder prediction 298 366 - -
Lele30g0959 431 MobiDBLite consensus disorder prediction 146 207 - -
Lele30g0959 431 Gene3D - 29 82 - -
Lele30g0959 431 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Lele30g0959 431 SMART sant 82 130 IPR001005 -
Lele30g0959 431 SMART sant 29 79 IPR001005 -
Lele30g0959 431 MobiDBLite consensus disorder prediction 298 336 - -
Lele30g0959 431 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Lele30g0959 431 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Lele30g0959 431 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 20 407 - -
Lele30g0959 431 FunFam Transcription factor GAMYB 85 131 - -
Lele30g0959 431 MobiDBLite consensus disorder prediction 171 207 - -
Lele30g0959 431 Pfam Myb-like DNA-binding domain 33 93 - -
Lele30g0959 431 MobiDBLite consensus disorder prediction 232 252 - -
Lele30g0959 431 CDD SANT 32 77 IPR001005 -
Lele30g0959 431 SUPERFAMILY Homeodomain-like 27 124 IPR009057 -
Lele30g0959 431 MobiDBLite consensus disorder prediction 337 363 - -
Lele30g0959 431 Gene3D - 85 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0959 Lele-ChrLele30 13218183 13220076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0959 4 147 MYB Transcription Factor Family AT5G06100 72.222 5.38e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele30g0959 Myb_DNA-bind_6 2.4e-15 CL0123