Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0949 ATGGGGTCGTTCATTTCTGTGCTCCTGAAGTTGTTCGAACTTGGCAGGTGCTTAGCTCTCGGAGGATTTTCAAGTTTTCCCAAAGCGGCGGCCCTCTTGATTGCAAGGTTAGGCCTAATGGCTATGACGAGGTTATTATTCCTTCTGTTTTTCTTCCTGTGGATTGCCACAGAAGTGGTTGCTAGAACCGGAAATACCATTACAAACAAGACTATAGTTCCTCCGTGGCCAAGCGTCGTGAGAATCGGAGCACTGTTTACTTTCGATTCGGTCATTGGAAAATCAGCTAAACCTGCTATTTTAGCTGCCGTCGATGATGTTAATAATGATACAAGCGTTCTTCCTGGTACTAAAATGGAAGTTGTTTTACATGATACAAACTGCAGCGGGTTTCTCGGCACAGTGGAAGCTCTGCAGTTGGTGGAGAATGATGTGGTTGCTGCCATTGGTCCGCAGTCATCTGGAATAGCTCATGTCATCTCTCATGTTGTTAATGAACTCCATGTGCCTCTTCTCTCATTTGGGGCCACAGACCCTACTCTTGCTTCTCTGCAGTACCCTTATTTTGTCCGCACTACCCAGAATGACTATTTTCAGATGAACGCAATCGCGGACTTGGTTGACTACTTTGGTTGGAAGGAGGTGATTGTCATCTTTGTAGATGATGATAATGGAAGAGGTGGAGTTTCAGCTCTAGGCGATGCGCTTGCGAAGAAGCGTGCCATGATCTCTTATAAGGCTGCCTTTACTGCTGGAGCCTCTGCAAGTAATATCAGTGACTTGTTAAATAAGGTCAACTTAATGGAATCCCGGGTCTATGTTCTCCATGTTAACCCTGATACTGGTTTGTCCATTTTTTCTATGGCGAACAAAATTGGTATGATGGGCAGTGGTTATGTTTGGATTGCAACAGATTGGCTTCCTTCAGTTCTAGATGCATCAGAACCAGCTGATCCTGAAACAATGAATGTCTTACAAGGGGTTATCGCCTTACGCCATCATACTCCTGAAACTGATCTCAAGAAAAGGTTTATCTCTAGGCTGAAAAAAAGTAAAGATAAGGACACTACGACCTTTAATTCCTATGCATTATATGCATATGATTCAGTTTGGTTAGCAGCACGTGCTCTTTATGCGTTTCTTAATGAAGGTGGAAATGTATCTTTCAGTAGTGACCCTAGATTGCATGACACAAATGGAAGCATGTTGCATTTTGCATCACTTCGTACTTTTGATGGTGGCCCACAGTTTCTCCAGAAAGTTCTGGCAATGAACTTCACTGGTCTGAGTGGTCGAATTCAGTTTGATGGGGACAAGAATTTAATCCATCCAGCGTATGATATTCTAAACATTGGAGGATCTAGCCGTAGAATTGGTTATTGGTCTAATTACTCTGGCCTGTCAGTTGTAACACCTGAAATTTTATATACAAAACCGCCTAACATTTCAACTAGCAATCAGCATCTTTACGGTGTGATATGGCCGGGAGAGACTACGGTAATTCCTCGGGGATGGGTGTTTCCCAACAATGGAAAGTCACTGAGAATAGCAGTACCAAACCGAGTAAGCTATCAAGAGTTTGTTTCCAGAAACAAGGACCCCCCAGGTGTAAGAGGTTATTGCATTGATGTCTTTGAAGCAGCCATAAACCTGCTGCCATATCCTGTCCCACGACAATATATATTATATGGAGATGGTCTTAGAAATCCCAACTACAATGCCCTCACGGATGCAGTTGCACAAAATAATTTCGATGCAGCTGTTGGAGATGTTACAATTGTCACAAACAGGACAAGGATTGTGGATTTTACTCAACCTTTCATGGAATCAGGGTTGGTTGTAGTCGTTGCTGTTAAGGAGGAGAAGTCAAGCCCTTGGTCATTTCTCAAGCCATTCAATGCACAAATGTGGTGCGTCACTGGTGCCTTCTTTCTCTTCGTGGGAGCCGTGGTATGGATTCTTGAGCACCGGCTCAATCACGAGTTCCGTGGTTCTCCAAGGAAACAACTTATGACCATTTTTTGGTTTAGCTTCTCAACAATGTTTTTCTCACATAGACAAAACACTGTGAGCACTTTGGGGAGGTTGGTGTTACTGATATGGCTTTTTGTGGTGTTAATCATCAATTCAAGCTACACTGCTAGCTTGACATCGATCCTCACGGTACAGCAACTATCAACTCAGATTGCAGGAATTGGCAGCTTGATTTCAAGTAATCAACCTATTGGAATTCAAGATGGGTCATTTGCGCGAAAGTATCTGATAAATGAGCTGAATATAGCTGAATCTAGGATAGTGACTTTGAAAAACCAGCAGGATTACATCGATGCCCTCCAACGTGGACCAAACGGTGGAGGGGTGGTGGCAATCGTCGACGAGCTTCCCTATATTGAGATATTAATGTCTAACACTAATTGTAAATTCAGAACTGTAGGCCAGGAGTTCACTAAAAGTGGATGGGGATTTGCATGCCAAAGGGACTCTCCCCTTGCTGTGGACTTGTCAACTGCCATTCTTCAACTATCGGAGAACGGCGACTTGCAAAAGATCCACGACAAATGGCTCTCAAAATTCACCTGTTCTGCAAAAGTCAACGACATTGACTCAAACCAGCTCTCTCTCAGCAGCTTCTGGGGCCTGTTTTTGATATGTGGGATTGCATGTTTCCTTGCTCTAGTTATATTCTCTATCAGGGTGTTCTGTCAATATATGAAATTTATCCCAGACAGTGATGTGGAAGCTGAAGAGCAGCGTATTGAACCTGGCAGTGCTAGAAGGACAATGAGATCCTCCACTGGCTTCAAGAACTGGATTGATTTTGTAGATAAAAAGGAAGCCGAAATAAAGGAGATATTGGGGGACAAGAATAAGAAACGACGGCGCAGCCAGAGCTTAGACGGGATCTCCAATTATTCAAACAGCTAA 2925 0.4345 MGSFISVLLKLFELGRCLALGGFSSFPKAAALLIARLGLMAMTRLLFLLFFFLWIATEVVARTGNTITNKTIVPPWPSVVRIGALFTFDSVIGKSAKPAILAAVDDVNNDTSVLPGTKMEVVLHDTNCSGFLGTVEALQLVENDVVAAIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLASLQYPYFVRTTQNDYFQMNAIADLVDYFGWKEVIVIFVDDDNGRGGVSALGDALAKKRAMISYKAAFTAGASASNISDLLNKVNLMESRVYVLHVNPDTGLSIFSMANKIGMMGSGYVWIATDWLPSVLDASEPADPETMNVLQGVIALRHHTPETDLKKRFISRLKKSKDKDTTTFNSYALYAYDSVWLAARALYAFLNEGGNVSFSSDPRLHDTNGSMLHFASLRTFDGGPQFLQKVLAMNFTGLSGRIQFDGDKNLIHPAYDILNIGGSSRRIGYWSNYSGLSVVTPEILYTKPPNISTSNQHLYGVIWPGETTVIPRGWVFPNNGKSLRIAVPNRVSYQEFVSRNKDPPGVRGYCIDVFEAAINLLPYPVPRQYILYGDGLRNPNYNALTDAVAQNNFDAAVGDVTIVTNRTRIVDFTQPFMESGLVVVVAVKEEKSSPWSFLKPFNAQMWCVTGAFFLFVGAVVWILEHRLNHEFRGSPRKQLMTIFWFSFSTMFFSHRQNTVSTLGRLVLLIWLFVVLIINSSYTASLTSILTVQQLSTQIAGIGSLISSNQPIGIQDGSFARKYLINELNIAESRIVTLKNQQDYIDALQRGPNGGGVVAIVDELPYIEILMSNTNCKFRTVGQEFTKSGWGFACQRDSPLAVDLSTAILQLSENGDLQKIHDKWLSKFTCSAKVNDIDSNQLSLSSFWGLFLICGIACFLALVIFSIRVFCQYMKFIPDSDVEAEEQRIEPGSARRTMRSSTGFKNWIDFVDKKEAEIKEILGDKNKKRRRSQSLDGISNYSNS 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0949 974 FunFam Glutamate receptor 195 354 - -
Lele30g0949 974 FunFam Glutamate receptor 751 859 - -
Lele30g0949 974 Pfam Bacterial extracellular solute-binding proteins, family 3 571 856 IPR001638 -
Lele30g0949 974 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 284 307 - -
Lele30g0949 974 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 153 181 - -
Lele30g0949 974 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 93 109 - -
Lele30g0949 974 CDD PBP1_GABAb_receptor_plant 81 470 IPR044440 -
Lele30g0949 974 SUPERFAMILY Periplasmic binding protein-like I 75 506 IPR028082 -
Lele30g0949 974 Gene3D - 625 743 - -
Lele30g0949 974 CDD GluR_Plant 512 855 - -
Lele30g0949 974 FunFam Glutamate receptor 509 625 - -
Lele30g0949 974 SUPERFAMILY Periplasmic binding protein-like II 490 855 - -
Lele30g0949 974 Pfam Ligand-gated ion channel 857 888 IPR001320 GO:0015276|GO:0016020
Lele30g0949 974 Gene3D - 744 858 - -
Lele30g0949 974 Gene3D - 99 443 - -
Lele30g0949 974 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 80 921 - -
Lele30g0949 974 SMART GluR_14 515 857 IPR001320 GO:0015276|GO:0016020
Lele30g0949 974 Coils Coil 941 961 - -
Lele30g0949 974 PIRSF IGluLR_plant 39 973 IPR017103 -
Lele30g0949 974 FunFam Glutamate receptor 625 755 - -
Lele30g0949 974 Gene3D - 195 467 - -
Lele30g0949 974 Pfam Receptor family ligand binding region 97 452 IPR001828 -
Lele30g0949 974 Gene3D - 509 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0949 Lele-ChrLele30 13130099 13134631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0949 77 825 Ion Channels AT1G05200 68.933 0.0 1120