Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0933 ATGGAACCTCTATGTGATCTTTGTGGGGTTGTAAGAGCAGTGGTGTACTGTAAGTCAGATTCTGCTCGTCTCTGCTTGAATTGCGATGGCCGTGTACACTCTGCGAATGCTGTGTCACGCCGTCATCCTCGTTCACTCTTATGTGATAAGTGCAATTCCCAGCCCGCAGTTGTCCGCTGCATGTATGATGAAATGTCTGTGTGTCAATCTTGTGACTGGAACCAAAATGGCTGTTCACAATTGGACCATAAGTGTCAGACATTGAGTTCTTACACTGGTTGTCCCTCTTCGGCCGACTTCTCAAAAATATGGTCCTTTGTTCTTGATGCTCCTCCTTCAGGTGGTCTTTGTGTTACTGGTTCTCGATCATTTACCACATTGCCTGGAAATGACAGCTGCTCCAGCATGTGTTTGAAGCAACCAGATGATGATGCATCTTCTGGTTTGGTGACTGGTAAGGCGAATGAAATAAAACCATGTGTCACATATGATCCTTGGATGGGACAATCTTCTAAGATCATACTACCAAACACAAATTTCTTGTCATGGTGCAGAGATCAACCATTTTCATTTCCTCTTGACTCAGATCTGGCAAAGGGATATCCTAATTTAAAGGATCTTGGGACTGCTTGTGGTGATGATCTCTGTGGAGGTGTCAACATAGGAGAACTTTCATTAAGCTTTGAAAGTGACGATGAAATACTCGATTGCACTCAAGAAGCCACCAGATACCATCTTGAGAATGGAGAAATTGACTATTTATTAATGGAAAAGAACATATCAGTGCCAGAACCTAATGATCTTATTGAGAATGCCTTAGAGGCATCTTCATCAGTTCAACAGGAGTATGTAACCTTCCAATCATCCAGGCCTAGCGGGTCAGTTAACGTGGGTCACAGCATTAACAGTAATGCAAATCCTATACCCATGAATCTGAGCTGCAACCAAAACGTCAATCTAGGATATCCTCATGGTCAAGTGCCTCCAAGCATGTCAGTTTCATTATCAAGCATTAGTGGTGAAAATAGTACCCCTGATTATCAAGATTGTGGATTATCACCAGCATTCCTGACCGGTGTTAGCCAGTGGGAACCAAATTTTGGGCCCTCGTGCCCACAAGCAAGGGACAGAGCTAAAAGGAGATACAACGAGAAAAAGAAAACCCGGACGTTTGGTAAACAAATAAGATATGCATCTCGCAAGGCCAGAGCTGATACTAGAAAACGGGTGAAAGGTAGATTTGTGAAAGCTGGCGAAGCATATGATTATGATCCTGAAGTCACTGGGAACTTCTAA 1296 0.4329 MEPLCDLCGVVRAVVYCKSDSARLCLNCDGRVHSANAVSRRHPRSLLCDKCNSQPAVVRCMYDEMSVCQSCDWNQNGCSQLDHKCQTLSSYTGCPSSADFSKIWSFVLDAPPSGGLCVTGSRSFTTLPGNDSCSSMCLKQPDDDASSGLVTGKANEIKPCVTYDPWMGQSSKIILPNTNFLSWCRDQPFSFPLDSDLAKGYPNLKDLGTACGDDLCGGVNIGELSLSFESDDEILDCTQEATRYHLENGEIDYLLMEKNISVPEPNDLIENALEASSSVQQEYVTFQSSRPSGSVNVGHSINSNANPIPMNLSCNQNVNLGYPHGQVPPSMSVSLSSISGENSTPDYQDCGLSPAFLTGVSQWEPNFGPSCPQARDRAKRRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPEVTGNF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0933 431 ProSiteProfiles CCT domain profile. 375 417 IPR010402 GO:0005515
Lele30g0933 431 Pfam CCT motif 375 417 IPR010402 GO:0005515
Lele30g0933 431 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lele30g0933 431 CDD Bbox1_BBX-like 4 47 - -
Lele30g0933 431 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lele30g0933 431 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0933 Lele-ChrLele30 13036426 13038239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0933 1 425 C2C2-CO-like Transcription Factor Family AT3G21880 40.326 3.44e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele30g0933 CCT 1.9e-15 CL0281