Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0932 ATGTGCAAGGGTGCAGGAGAGGAAAAGCATGGTGGTTTCTGCAGGCGTAGCCACCTCCGGCCACCTGAAGACGACACGTCGCATGGCGAAACCAGAGGTTCAATACCGTGTGAGCTATGTGGGTTAAGGGCTTCGCTGTATTGTCTGGCTGATAAGGCGTATCTATGTAGAAAGTGTGACAAATGGGTTCATAAAGCAAATTTCTTGGCCTTTAGGCACGTAAGATTTTCTATTCAAATATTTATTGGTCAAACCAATCTTTCCATGGACACAGGTCTCAAAATTGGCGACGAACCGATGTGTACAATTCCTCTGGAATCAGGAAAGACTAAACAGACTGGATTCTATAACCTGTCAAAAGCTCTAAGAGATCTGTAA 378 0.4471 MCKGAGEEKHGGFCRRSHLRPPEDDTSHGETRGSIPCELCGLRASLYCLADKAYLCRKCDKWVHKANFLAFRHVRFSIQIFIGQTNLSMDTGLKIGDEPMCTIPLESGKTKQTGFYNLSKALRDL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0932 125 MobiDBLite consensus disorder prediction 1 32 - -
Lele30g0932 125 Pfam B-box zinc finger 36 73 IPR000315 GO:0008270
Lele30g0932 125 SMART bboxneu5 32 78 IPR000315 GO:0008270
Lele30g0932 125 MobiDBLite consensus disorder prediction 1 31 - -
Lele30g0932 125 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 36 75 - -
Lele30g0932 125 CDD Bbox1_BBX-like 36 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0932 Lele-ChrLele30 13034560 13036239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0932 1 75 C2C2-CO-like Transcription Factor Family AT3G21890 49.383 3.75e-17 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele30g0932 zf-B_box 9.5e-06 No_clan