Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0914 ATGATAATAATCCTCTCTTTTCTCTCGCGTCTTCACATGATACCCGTTGCTCTGCTTTGTGCTCTTTTACTCTGTCTTCCTCCGCCCTGCTTAGCTGGCGATACTCTGAAGATCGGTGAAAGCATTCCTGACAGGGAAAATGGCAGTGCCAACCTTGTGTCAGCAGGACAGAAGTTTGAGCTGGGTTTCTTTTCCCCTGCTGGAAGCCAAAACAGATACCTAGGAATATGGTATTATCTGATAGAACCACGAACATTTGTCTGGGTTGCTAACAGAGACCACCCCATTCCTGATTCTACTGGAATTTTTCAAATTTCGCAAGATGGAAATCTCACAGTGTCAGGTACAGAAGGAAATCCTTATTGGTCTTACAGATCTAAACATTTATCTTCTCCCGAAAACCTGACGGTGAAGCTTATGGATTCTGGCAACTTAATTCTAGAAGACGCTCAATTACAGAGGATCTACTGGCAAAGCTTCCAACACCCTACGGACACATTTTTGCTGGGCATGAAAATGGATGAACATCTAGTCTTAAATTCTTGGAGAGCTTCCGGTGATCCCAGGAGTGGGAAATATACGTTTGCAGGTGGAAAAATAGGGGATAGCAACTATACAATCTACGTCAACCAGAGCCAAGTTCACTGGGCAGGTGAAACACACCAAGATTTCGGCTCAGAAGGAAAAATACTTTCGCTGTTGACGAACTCCACCCAAAGACCTTCTACTTTTAAACACAGAAACATGTCAACAATTTCACTTCTTTCTTTTGAGACTGCAAGGCTAGTGATGAATTATACAGGGCACATAGAGCTTTGGCGCTGGGATGAGGTCGGAGGATGGATGCGCGCATGGAATGAGCCAGATAATAATTGCAAGATACATAACTTCTGTGGGAACTTCGGCAGTTGCAATATTAATAGTTCGCCATCCTGTAAATGTTTGCCTGGATTCACTTCTAAGTCGCTGGGGGAGAATCAGATTCCGTCATTTGAATCTGAAGGGTGTTTCAGAAAAAAGACGTCATGTGGGCAAAACACGACAACATTCATAGACTTGGAGAAGGTGAAAGTGAGAAAACCAGACAAAAAAGTCGACGCAGGGAACGAAACAGGGTGCCGATCTGAGTGCCTCAATATGTGCCCCACTTGCACCGCGTATTCATATGATGCATCAGCAAATAACTATAGTAGGTCGTTATCACCATGTTCTATTTGGACTTCTGATTTAACTACAATTCAAGAAGAGATTGATTGGGGCTTTAATCTTTCTGTCCTGGTAAATAAACAAGATATAGAACCAACTCCAAGAACGTGCAAACCTTGTGGTGCATTCACAATTCCTTATCCGCTGAGCACTGAACCAAGTTGTGGTGATCCCATTTACTTCAATTTCACATGCGACTCCCCAACCGGGCAGGTTAGTTTCCCTGTAGGAGAAGAGAGTTATAAAATTACTAATATTGATCCAGGCAACAGATCGTTCTCTATTCAAATCCCTGGTTCGGAGGATTGTTCTGCAAGCAATCTCGTGCATCAGCTTCGTCCGCCATTTAGTGCTACTCAACAATGCAATGATGGTGACAAAGTAAAGACACTAGAGATTAATTGGTCTCCCCCAGGTGAACCTCCCTGTAATAACTCCATAGACTGCAAGGACTGGTCTCATTCAACTTGCAAAGCAGCCATAGATGGAAATGGAAGATGCCTCTGCGATAAAAAATATCAATGGAATGGCCACAATTTAAGCTGTACGCAAGGGCCTCCAAGAAACAGCTCTAAAGTTTTGATATTAGCGGTGACATTTTCAAGCTTGATTTTCTTGGCCTGCATTACAACTTCTGCTTACATTTGGAGAAGAAAAGTAGCCTTTAAGCAAGAAAAGGCACAAAATCAAAGAATGAGACAGAGCCTACAAGACAGTGAGAGATACATCAAAGAATTCATGGACGCCGAGAGGTTAGGGGAAAATGACAGTGAAGGAATAGAGGTTCCTTATTTGGATTTGAATAGCATCCTATTAGCCACAGATAACTTCTCAGATGCGAACAAGCTTGGACGTGGGGGTTATGGACCAGTCTACAAGGGCAAGCTTCAAGGAGGTCAAGATATTGCTGTGAAGAGGCTTTCAAGTGTTTCTTCACAAGGACTGAAGGAATTCAAGAATGAAGTTGTGCTGATATCCAAACTTCAACATCGAAACCTTGTTAGACTTAAGGGCTATTGCATTACAGGAGAAGAAAAAATATTACTTTATGAATACATGCCAAACAAGAGCTTAGACACATTCTTATTCGATCGTACACAAAGGGTGATTTTGGATTGGCCAATGCGTTTTGACATAATTCTAGGAGTTGCTAGAGGGATGTTATATCTTCATCAAGACTCTAGATTGAGGGTAATTCATAGAGATTTAAAAACTAGTAATATTCTTTTGAACGAAGAGATGCAACCAAAAATTTCAGACTTTGGACTTGCAAAAATATTTGGAGTCAAGGAGATTGAGGCTAACACTGAGAGAGTAGTTGGAACTTATGGATATCTGGCTCCAGAGTATGCATTGGATGGATTTTTCTCGATTAAATCAGACGTTTTTAGCTTTGGTGTTGTAATGCTTAAAATTATTAGTGGAAAGAAGAACACGGGATTCTTTCAATCCAAACAAACTTCTAGCCTTCTGGGTTATGCATGGAGGCTATGGGCAGAGAATAACTTGATGGATTTAATGGATCGATGTTTGAATGAAAGCTGCAACGAAAATCAGTTCATAAAGTGTGCACAAGTGAGTCTACTGTGCGTACAAGATGAACCAGGAGACAGGCCCAGCATGTCGCAAGTAATGATAATGCTTGAAAGTGAGACTGCAAGCCTCCCAACTCCAAAGCAACCAACATTTTTTATGAACAGTTGCAGGGGCATTTATAGCTCTGCTTCTTCTTCAAGTAAATCTGGAGGAATTCTTCCAACTAATACTACCTATCAAGAAGGTCGGTAG 2994 0.4165 MIIILSFLSRLHMIPVALLCALLLCLPPPCLAGDTLKIGESIPDRENGSANLVSAGQKFELGFFSPAGSQNRYLGIWYYLIEPRTFVWVANRDHPIPDSTGIFQISQDGNLTVSGTEGNPYWSYRSKHLSSPENLTVKLMDSGNLILEDAQLQRIYWQSFQHPTDTFLLGMKMDEHLVLNSWRASGDPRSGKYTFAGGKIGDSNYTIYVNQSQVHWAGETHQDFGSEGKILSLLTNSTQRPSTFKHRNMSTISLLSFETARLVMNYTGHIELWRWDEVGGWMRAWNEPDNNCKIHNFCGNFGSCNINSSPSCKCLPGFTSKSLGENQIPSFESEGCFRKKTSCGQNTTTFIDLEKVKVRKPDKKVDAGNETGCRSECLNMCPTCTAYSYDASANNYSRSLSPCSIWTSDLTTIQEEIDWGFNLSVLVNKQDIEPTPRTCKPCGAFTIPYPLSTEPSCGDPIYFNFTCDSPTGQVSFPVGEESYKITNIDPGNRSFSIQIPGSEDCSASNLVHQLRPPFSATQQCNDGDKVKTLEINWSPPGEPPCNNSIDCKDWSHSTCKAAIDGNGRCLCDKKYQWNGHNLSCTQGPPRNSSKVLILAVTFSSLIFLACITTSAYIWRRKVAFKQEKAQNQRMRQSLQDSERYIKEFMDAERLGENDSEGIEVPYLDLNSILLATDNFSDANKLGRGGYGPVYKGKLQGGQDIAVKRLSSVSSQGLKEFKNEVVLISKLQHRNLVRLKGYCITGEEKILLYEYMPNKSLDTFLFDRTQRVILDWPMRFDIILGVARGMLYLHQDSRLRVIHRDLKTSNILLNEEMQPKISDFGLAKIFGVKEIEANTERVVGTYGYLAPEYALDGFFSIKSDVFSFGVVMLKIISGKKNTGFFQSKQTSSLLGYAWRLWAENNLMDLMDRCLNESCNENQFIKCAQVSLLCVQDEPGDRPSMSQVMIMLESETASLPTPKQPTFFMNSCRGIYSSASSSSKSGGILPTNTTYQEGR 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0914 997 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 220 IPR036426 -
Lele30g0914 997 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 128 976 - -
Lele30g0914 997 SMART blect_4 43 163 IPR001480 -
Lele30g0914 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Lele30g0914 997 Gene3D Transferase(Phosphotransferase) domain 1 755 962 - -
Lele30g0914 997 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 160 - -
Lele30g0914 997 CDD STKc_IRAK 685 951 - -
Lele30g0914 997 ProSiteProfiles PAN/Apple domain profile. 343 439 IPR003609 -
Lele30g0914 997 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 644 754 - -
Lele30g0914 997 ProSiteProfiles Protein kinase domain profile. 679 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0914 997 Gene3D - 31 162 IPR036426 -
Lele30g0914 997 Pfam Protein tyrosine and serine/threonine kinase 683 947 IPR001245 GO:0004672|GO:0006468
Lele30g0914 997 SUPERFAMILY Protein kinase-like (PK-like) 662 978 IPR011009 -
Lele30g0914 997 Pfam S-locus glycoprotein domain 251 321 IPR000858 GO:0048544
Lele30g0914 997 Pfam PAN-like domain 343 411 IPR003609 -
Lele30g0914 997 Pfam D-mannose binding lectin 85 175 IPR001480 -
Lele30g0914 997 CDD B_lectin 52 163 IPR001480 -
Lele30g0914 997 SMART serkin_6 679 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0914 997 CDD EGF 292 319 - -
Lele30g0914 997 Gene3D Phosphorylase Kinase; domain 1 642 754 - -
Lele30g0914 997 ProSiteProfiles Bulb-type lectin domain profile. 37 160 IPR001480 -
Lele30g0914 997 MobiDBLite consensus disorder prediction 976 997 - -
Lele30g0914 997 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 755 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0914 Lele-ChrLele30 12938601 12943202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0914 667 973 Receptor kinase-like Gene Family AT4G23140 55.272 4.36e-121 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele30g0914 PK_Tyr_Ser-Thr 5.8e-45 CL0016