Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0911 ATGGAGAACCACCTATGGTGCTTTCTCTCTGTTCTTCTCCTCTGTTCCTCTTTTCCCAGCATACCTTCTCAAGCTGCTGATACCATCTCTGCAAATCAAACTCTTTCTGGGGATCAAACTATCGTCTCATCAGGTGGTGTCTTCGAATTGGGTTTCTTCAAACCAGGTAATTCTTCAAACTACTACATAGGCATCTGGTATAAAAAGGTCTCTCAACAGACCGTTGTTTGGGTCGCAAACAGAGACATCCCTGTCTCTAATAAAAATTCGGCCAATTTAGTTGTATCCAACAGTAATTTAGTTCTCCTCAACGAGTCCCAAATCCCAGTTTGGTCGACAAATTTGACTTCCACCACATCGAAGTCTGTTGTTGTCGTCCTCCTGGATTCTGGGAATCTTGTCCTAAGAGACAAGCCGGAATCTTCAGAAAACTTGTGGCAGAGTTTTGATAACCCGACCGACACGTGGCTTCCTGGAGGTAAAATTAAACTCGACAATAAGACAAAAAAGCCTCAATATCTTACTTCCTGGAAGAACAATGAAGATCCTGCGACGGGTCTCTTCTCTCTGGAGCTTGACCCGAAGGGAACCACCTCGTACTTAATTCTTTGGAACAAGTCTGAACAGTATTGGACAAGTGGTCCTTGGAATGGCCAAATTTTCAGCTTGGTCCCTGAAATGAGGGCGAATTTCTTGTACAATTTCACCTTTGTTTCAAACGAGAACGAGAGCTATTTCACTTACTCCATGTATAACTCTTCTGTTATATCTCGTTTCGTGATGTCAATCTCGGGACAGATCCAGCAACTCTCATGGCTAGAAAGCAGCCGGCAGTGGAATTTGTTTTGGTCTCAGCCAAGACGACAGTGTGAGGTTTATGCTATTTGTGGCACATTTGGGAGCTGCAATGAGAATTCCCTGCCGTTTTGTACTTGCTTGACTGGTTTCGAGCCAAAGTCACATACTGATTGGGATCTGCAGGATCACTCGAGTGGTTGCGTGAGGAAAACCAAGTTGCAATGTGAGAATCCAAGATCGTCTAACAGAGAGAAAGATAGGTTTTTGGCCATGCCAAACGTGGCCTTACCTAAACATTCACAATCTGTAGGTATAGGGAATGCTGATGAATGCGAGTCCACGTGCTTGAACAATTGCTCTTGCGCTGCTTATGCTTATGACACTAACGGTTGCTCTGTTTGGAATGGAGATTTATTAAGTCTGCAGCAACTTTCTCAAGATGATAGTAATGGAGAAACTTTATATCTAAAACTTGCAGCTTCTGAGTTTTCTGATACTAAACGGAAAACTGGAGAAATTATTGGTATAGTGGTGGGCACTTTAGGGGGTTTAGGGGTTCTCCTGGCCATTCTGCTGTTTGTGATAATCAGAAGAAGGAGAATTGTTGGAAAAGGAAAATCGGTGGAGGGTTCATTGATGGCATTCGGGTACAGAGATTTACAAAATGCAACGAAGAATTTCTCTGAAAAACTAGGAGGAGGAGGTTTTGGTTCTGTTTTCAAAGGCACATTGTCGGATTCCAGTGTCGTAGCAGTGAAGAAGCTTGAAAGCATAAGCCAGGGTGAGAAACAGTTTCGATCAGAAGTCAGTACCATAGGTACAGTCCAACATGTTAATCTTGTTCGTCTCCGTGGGTTCTGCTCTGAAGGCAACAGAAAGCTTCTGGTTTATGATTACATGCCAAATAGCTCATTGAATGCCCATCTGTTTCAAGAAAAGAACTCCAAGAAATTAGAATGGAAATTGAGGTACCAAATTGCTCTAGGAATAGCGAGGGGACTAACTTATCTCCACGAGAAGTGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAAAACATCCTTTTAGATTCTAATTTTTGCCCAAAAGTTGCAGACTTTGGCCTGGCAAAGCTAGTTGGAAGGGATTTCAGCAGAGTTCTCACAACCATGAGAGGGACAAGAGGTTATCTTGCCCCAGAGTGGATTTCTGGTGTGGCTATCACAGCAAAAGCTGATGTTTACAGCTATGGTATGATGCTTTTTGAATTTGTGTCAGGTAGGAGGAATTCTGAGGCATCTGAAGATGGCCAAGTGAAGTTCTTTCCTACATGGGCTGCACATGTAGTAGTCCAAGGAGGCGATGTTCTTGACCTTTTGGATCCTGCATTGGAGCGGAATGCAGACATAGAGGAGCTGACTAGGATAATAAAACTAGCTTCATGGTGCGTACAAGATGAAGAGAGTCACAGGCCATCCATGGGTCAGATAGTTCAAATACTTGAGGGTGTTTTGGATGTGAATTTGCCTCCAATTCCAAGATCCCTCCAAGTGTTTGTTGATAACCAGGAGAACATAGTTTTCTTCACTGATTCAAGCTCCAACCAGAGTTCACAGACAAGAAGCAACACCTCAGCAGTATCTGGTCAAGCCAAAAGCAACATCTCATCGACAAGCTCCAAGTCCTCAAGAGAAAAATAG 2481 0.4333 MENHLWCFLSVLLLCSSFPSIPSQAADTISANQTLSGDQTIVSSGGVFELGFFKPGNSSNYYIGIWYKKVSQQTVVWVANRDIPVSNKNSANLVVSNSNLVLLNESQIPVWSTNLTSTTSKSVVVVLLDSGNLVLRDKPESSENLWQSFDNPTDTWLPGGKIKLDNKTKKPQYLTSWKNNEDPATGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGQIFSLVPEMRANFLYNFTFVSNENESYFTYSMYNSSVISRFVMSISGQIQQLSWLESSRQWNLFWSQPRRQCEVYAICGTFGSCNENSLPFCTCLTGFEPKSHTDWDLQDHSSGCVRKTKLQCENPRSSNREKDRFLAMPNVALPKHSQSVGIGNADECESTCLNNCSCAAYAYDTNGCSVWNGDLLSLQQLSQDDSNGETLYLKLAASEFSDTKRKTGEIIGIVVGTLGGLGVLLAILLFVIIRRRRIVGKGKSVEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLSDSSVVAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSEGNRKLLVYDYMPNSSLNAHLFQEKNSKKLEWKLRYQIALGIARGLTYLHEKCRDCIIHCDIKPENILLDSNFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEASEDGQVKFFPTWAAHVVVQGGDVLDLLDPALERNADIEELTRIIKLASWCVQDEESHRPSMGQIVQILEGVLDVNLPPIPRSLQVFVDNQENIVFFTDSSSNQSSQTRSNTSAVSGQAKSNISSTSSKSSREK 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0911 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Lele30g0911 826 MobiDBLite consensus disorder prediction 791 826 - -
Lele30g0911 826 SMART blect_4 32 152 IPR001480 -
Lele30g0911 826 CDD STKc_IRAK 497 763 - -
Lele30g0911 826 FunFam Serine/threonine-protein kinase 21 149 - -
Lele30g0911 826 FunFam Serine/threonine-protein kinase 566 769 - -
Lele30g0911 826 FunFam Serine/threonine-protein kinase 458 565 - -
Lele30g0911 826 MobiDBLite consensus disorder prediction 791 820 - -
Lele30g0911 826 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Lele30g0911 826 Gene3D - 21 149 IPR036426 -
Lele30g0911 826 SUPERFAMILY Protein kinase-like (PK-like) 476 798 IPR011009 -
Lele30g0911 826 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Lele30g0911 826 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Lele30g0911 826 Gene3D Transferase(Phosphotransferase) domain 1 566 769 - -
Lele30g0911 826 PIRSF SRK 1 815 IPR024171 GO:0004674
Lele30g0911 826 CDD PAN_AP_plant 337 425 - -
Lele30g0911 826 ProSiteProfiles Protein kinase domain profile. 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0911 826 SUPERFAMILY Hairpin loop containing domain-like 352 413 - -
Lele30g0911 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 217 IPR036426 -
Lele30g0911 826 SMART ntp_6 349 424 IPR003609 -
Lele30g0911 826 SMART serkin_6 491 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0911 826 Gene3D Phosphorylase Kinase; domain 1 461 565 - -
Lele30g0911 826 PANTHER OS07G0415500 PROTEIN 9 773 - -
Lele30g0911 826 Pfam PAN-like domain 349 406 IPR003609 -
Lele30g0911 826 Pfam D-mannose binding lectin 74 178 IPR001480 -
Lele30g0911 826 CDD B_lectin 32 152 IPR001480 -
Lele30g0911 826 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0911 826 ProSiteProfiles PAN/Apple domain profile. 341 425 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0911 Lele-ChrLele30 12916627 12919107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0911 450 771 Receptor kinase-like Gene Family AT5G20050 41.620 1.93e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele30g0911 Pkinase 3.3e-50 CL0016