Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0907 ATGGTGAGAGGTCCCTTCTTCGACGCAAATGGAGTTAAGAAAGGTGCATGGAGTGAAGAAGAAGACCAGAAGCTGATATCTTATATTCAGAACCATGGGCATCCTAATTGGCGCCAACTCCCTAAGTTTGCAGGCTTGGCAAGATGCGGAAAGAGCTGCAGGCTTCGATGGATGAACTACCTGCGACCAAATCTGAAACGCGGGAACTATACTCCACAAGAGGAGGAAATGATCCTCAAACTACACGAACAACATGGAAATAAGTGGTCGCTGATTGCAGAGAAGTTGCCTGGAAGAACAGACAACCATATAAAGAATCATTGGCACAGCCAACTGAAGAGGCGACCGAGGGACAGAGGAAGGAGTGATTCTGAGGTGAAAGGAAAGAAGTCAGATCGTCACAGTAATACGACTGAGGAATTAGAATATGATGTTGTGAAAGTTGTGAATGAGTTGAATAATATATTTGAAAGCTCATCACTGGACTGGGCGGAAACCACGTCGTCGACCGCCCCGGCCGAGCAAGACCACTCTGCTTCCATGCCTTCTATTGATACAGAATCTACCACCAAGAATTCGCCAGAGGAATATAATAGCGTGGCTTCGTGGGAAGTCAATAAATTCCAAGCATATAGCGGCGATTTTTGGACTGAACCGTTTATATCTGAAGATATTTACAGTGAATATTGCTATCCAAATATAGGAGGAGGCAGTGCCGCCGCCGGAGACATATATTCATATGATGGCGCAGTGTTGTTTTTCTAG 765 0.4536 MVRGPFFDANGVKKGAWSEEEDQKLISYIQNHGHPNWRQLPKFAGLARCGKSCRLRWMNYLRPNLKRGNYTPQEEEMILKLHEQHGNKWSLIAEKLPGRTDNHIKNHWHSQLKRRPRDRGRSDSEVKGKKSDRHSNTTEELEYDVVKVVNELNNIFESSSLDWAETTSSTAPAEQDHSASMPSIDTESTTKNSPEEYNSVASWEVNKFQAYSGDFWTEPFISEDIYSEYCYPNIGGGSAAAGDIYSYDGAVLFF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0907 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele30g0907 254 MobiDBLite consensus disorder prediction 100 138 - -
Lele30g0907 254 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele30g0907 254 Gene3D - 69 142 - -
Lele30g0907 254 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 197 - -
Lele30g0907 254 MobiDBLite consensus disorder prediction 116 138 - -
Lele30g0907 254 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele30g0907 254 CDD SANT 69 109 IPR001005 -
Lele30g0907 254 FunFam MYB-related transcription factor 13 66 - -
Lele30g0907 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele30g0907 254 SMART sant 66 114 IPR001005 -
Lele30g0907 254 SMART sant 13 63 IPR001005 -
Lele30g0907 254 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele30g0907 254 MobiDBLite consensus disorder prediction 163 195 - -
Lele30g0907 254 CDD SANT 16 61 IPR001005 -
Lele30g0907 254 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele30g0907 254 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele30g0907 254 Gene3D - 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0907 Lele-ChrLele30 12894912 12895868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0907 1 202 MYB Transcription Factor Family AT2G31180 44.554 1.12e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele30g0907 Myb_DNA-binding 8.1e-15 CL0123