Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0904 ATGGGAAGAGCACCTTGCTGCGACAAAAATGGCCTCAAGAAAGGTCCCTGGACCCCTGAAGAAGACGCCAAGCTCATTCGTTACATTCAAACTCATGGCCCTGGCAATTGGCGCACCCTCCCCAAGAATGCTGGTATTGAAAGATGTGGCAAGAGTTGCCGACTTCGATGGACTAATTACCTCAGGCCCGACATCAAGAGAGGAAGGTTCTCCTTCGAAGAAGAAGAGATCATTATCCAGCTCCACAGCATAATGGGAAACAAGTACGTTCCTTTAACGTGGTCGGCGATAGCGGCGAGATTGCCTGGAAGAACCGACAATGAAATAAAGAACTACTGGAACACCCACATACGAAAGAGGCTTCTTCGAATGGGAATCGACCCTGTTACTCACGCCCCACGCCTCGATCTTGTCGACATATCCTCCATTCTTGGGTCAGTGTTGGGAATGGGGAACACGTCGCTCTTGAATCTGCAGGGCTTGTTGGGAGCTCAGGCCTTGATGAACCCTGAATTGTTAAAGATGGCCACCACTCTGTTATCGTTGAAGAACGAAAACCCAGAACTGGTTTCACACAATCTTCAACAAATGATCCAACCTGTGGGGAATTCTCAAGTTCAAGCACAAGCCCCAATCGATCCCGCACTAGCGCAGTTCAGTAGCCAGTTTCAGTTGCCAATGGAAACAACCAACAACGGGGAAGGATTCTCAGGGGATTTGACGACCATGGGATTTTCAGATTCCCAAGTTCAGTCCTGTATGGCTGGGAACATTGATCTGTTGCAACAAAACCAAGCAGAATTTCTGGGAGATCCTAGTTTCCTGCAAAACATGGGCTATGACTCTGTTTTGTCGACGCCGTCATCGAGTACAACCCCATTGAACTCATCATCGACGCATGTGAACAATAGCAGTGGGGAAGAGGAGAGAGATAGCTATTGCAGCGACTTGTTCAAGTTCGAAATTCCAGAGAATTTAGATCTTAGTTACTTGCTGTAA 999 0.4785 MGRAPCCDKNGLKKGPWTPEEDAKLIRYIQTHGPGNWRTLPKNAGIERCGKSCRLRWTNYLRPDIKRGRFSFEEEEIIIQLHSIMGNKYVPLTWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLVDISSILGSVLGMGNTSLLNLQGLLGAQALMNPELLKMATTLLSLKNENPELVSHNLQQMIQPVGNSQVQAQAPIDPALAQFSSQFQLPMETTNNGEGFSGDLTTMGFSDSQVQSCMAGNIDLLQQNQAEFLGDPSFLQNMGYDSVLSTPSSSTTPLNSSSTHVNNSSGEEERDSYCSDLFKFEIPENLDLSYLL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0904 332 SUPERFAMILY Homeodomain-like 11 113 IPR009057 -
Lele30g0904 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 281 - -
Lele30g0904 332 Gene3D - 13 66 - -
Lele30g0904 332 Gene3D - 69 121 - -
Lele30g0904 332 MobiDBLite consensus disorder prediction 285 303 - -
Lele30g0904 332 FunFam MYB transcription factor 69 121 - -
Lele30g0904 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 121 IPR017930 -
Lele30g0904 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele30g0904 332 FunFam MYB-related transcription factor 13 66 - -
Lele30g0904 332 ProSiteProfiles Myb-like domain profile. 62 117 IPR001005 -
Lele30g0904 332 MobiDBLite consensus disorder prediction 285 309 - -
Lele30g0904 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele30g0904 332 CDD SANT 16 61 IPR001005 -
Lele30g0904 332 CDD SANT 69 117 IPR001005 -
Lele30g0904 332 SMART sant 66 119 IPR001005 -
Lele30g0904 332 SMART sant 13 63 IPR001005 -
Lele30g0904 332 Pfam Myb-like DNA-binding domain 67 116 IPR001005 -
Lele30g0904 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0904 Lele-ChrLele30 12855808 12856977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0904 1 329 MYB Transcription Factor Family AT4G21440 51.268 8.12e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele30g0904 Myb_DNA-binding 5.4e-13 CL0123