Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0882 ATGTTGCAATTTGCAAGTCAGAAAAAGTTGGAATCGTTTCAAAGTTTCAAATCTGATCATAAAAAGAAGGAAGAACGTAAAGGGTTATTCTACTTCCGTGCAAGCAAGGAAGTAAAGGAAGAGGAGGATGGCTTTGAAAGTCGGAACTGTACGCGTCGGCAAGGAGCGTGGCGCGGTGCTTTCACCGTTTACTGTAGACATTACAAAGGAGATATGTATGACTTGCACTCTTCTTTTTATAATTCATTTGCTGAAATTTTGAGCTCCTTACTTGCTCTGCGAGTTCATTTTGATCTCGGATTCCGTCCTCACTCTTCAGTCATGTACGAGATTTTCTCGTTATTTTTTTCTAAGATTGAACTGAGCCGGGGATCAATGGGTGGGATGAGATCTGGTTCTGAGTATAAAGGAGCCAAGATCTATGGACAAGTTTTATTGGGATTCATGTTGATCTGCACGATTCAGTTTTCACTAGCGGACACGAATCCTACTGACGTTTCTGCAATAAATAACTTATATGCTGCGCTGGGCTTTCCTGTTCTTCCTGGGTGGGTTCCAAGTGGGGGAGACCCGTGTGGACAAGCATGGCAAGGCATTCAGTGTAATGGTTCAGATATACAGACAATAGTTTTGGTTGGTGCAAATTTGGGAGGCGAACTGGGTGATAGCTTGGGAACGTTTGTTTCTATAAAGAAACTAGATCTAAGCAACAACCACGTTGGCGGAAGTATTCCAACCAGCTTGCCAGTCTCCTTGCAAAATTTTTTTCTTTCAGATAACCAGTTCACTGGAAGTATTCCAACCTCTTTATCTACATTGACTGAACTGACAGTCATATCTTTCAATGAAAATCAATTATCAGGAGAAATCCCGGATATATTTCAATCACTCACGAAATTGGTTAATCTAGATTTAGCGAATAACAATTTTAGTGGGGAACTGCCTCCATCTGCAGAGAATTTGTCAGCTTTGGCCTCCCTACATTTGCAGAACAATAAACTATCTGGGACCCTTGATGTTTTACAAGACCTTCCACTGAATGATTTGAATGTAGAGAACAACCAATTCAATGGACCAATTCCTCAAAAGCTTCTAAGCATCCCAAACTTCAGACAAGATGGAAACCCATTTAATGTTGTTAATGGTACTACAGCTTCAGCCCCTCCATCTCGTTCTCCAGCAACAACATCACCAGGAACTGTGGTTTCTGGGGCCCCAACTACTGGACATGTACCTACTACTAAACCGGCTGAAGGACCAACTGCATCAAAGGAATCAAATTCTGGAAAAACAAGAAAGAACACCAAAAGGGTGGTTTGGATATCTATTGCAAGTGTATTAGGATTTATTATTTTGGTGTTGGCACTCCTTCTTTTTGCTCCAAGATGTGGCAGAGGGGAAAGGGATGGCAGAAGAATTTCTAAGCAACACCAAATTGGAGCACATGGAGATGACAGACACAATCATAGGAATCATGGGACTTCAGCCCAACCACCCAGTCAAACTGAGAAAGTACCAAAGGGGGCTGTTGTGAGAACAAAAGAAGATCATCAAGCAGAGACCAGGAGAGTAGAAGCTATTCCCAGGTCACAAGATGAGCAAGAGAAAGATGTGCGAAGGATGAGAACACTACCCAAGCGGGATGATCATGAGATAGATATGAGAGCACTAGATGTGTACTCACTGCCTCCTCCCTCTCCACCTCCCCCTCCCCCTCCCCCTCCCCCTCCACCACCGCCCCCACCACTTGATGACAAGGTGACTGCTCCTTTCCATCGAGGGGATACGGTCAATCCTTCTGTGAAAAAGCCAGTTTCTCCCACTTTTGCAAAATCTTTCACTATTGCATCCCTTCAACAGTATACGAACAGCTTTTCTCAAGAAAACCTTATAGGAGGAGGCATGCTGGGGAATGTGTATAGGGCAGAGCTACCTGATGGGAAGCTACTTGCTGTGAAGAAACTGGACAAAAGAGCTTCTGAACATCAAAAGGATCATGAATTTCTTGAACTGGTAAACAGTATTGACAGAATCAGGCATGCAAATATTGTTGAACTTATCGGTTACTGTGCTGAGCATGGCCAAAGGCTTCTGATCTATGAGTATTGCAGTAATGGGTCACTGCAGGATGCACTGCATTCAGATGATGAGTTCAAAACAAGATTGTCGTGGAATGCTCGCATTCGGATAGCCCTTGGGGCGGCCAGAGCCTTAGAGTATTTGCATGAGATCTGCCAACCACCTGTTGTGCACAGAAATTTCAAGTCTGCCAATATTCTCCTTGATGATGATCTATCTGTGCGTGTTTCCGATTGTGGTTTGGCTCCCTTGATAGCTTCAGGTTCCGTAAGTCAGCTCTCAGGGCAACTGCTGACAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCTGGAATTTACACACACCAGAGTGATGTGTACAGTTTTGGAGTGGTTATGTTAGAACTATTGACAGGCCACCAGTCCTATGACAGGACACGCTCTCGGGGAGAGCAATCTCTAGTTAGATGGGCAATTCCCCAACTACATGACATTGATGCCTTATCAAATATGGTAGATCCTTCTCTCAATGGAGACTACCCAGCCAAATCATTGTCCAACTTTGCAGACATTATTTCTCAGTGTGTTCAGTCGGAGCCAGAATTTAGGCCACCTATGTCAGAGGTTGTTCAATATCTACTAGATATGATTAGGAAGGAATCTCACAGAAGTGGATTAAATGAAGACTGA 2748 0.4367 MLQFASQKKLESFQSFKSDHKKKEERKGLFYFRASKEVKEEEDGFESRNCTRRQGAWRGAFTVYCRHYKGDMYDLHSSFYNSFAEILSSLLALRVHFDLGFRPHSSVMYEIFSLFFSKIELSRGSMGGMRSGSEYKGAKIYGQVLLGFMLICTIQFSLADTNPTDVSAINNLYAALGFPVLPGWVPSGGDPCGQAWQGIQCNGSDIQTIVLVGANLGGELGDSLGTFVSIKKLDLSNNHVGGSIPTSLPVSLQNFFLSDNQFTGSIPTSLSTLTELTVISFNENQLSGEIPDIFQSLTKLVNLDLANNNFSGELPPSAENLSALASLHLQNNKLSGTLDVLQDLPLNDLNVENNQFNGPIPQKLLSIPNFRQDGNPFNVVNGTTASAPPSRSPATTSPGTVVSGAPTTGHVPTTKPAEGPTASKESNSGKTRKNTKRVVWISIASVLGFIILVLALLLFAPRCGRGERDGRRISKQHQIGAHGDDRHNHRNHGTSAQPPSQTEKVPKGAVVRTKEDHQAETRRVEAIPRSQDEQEKDVRRMRTLPKRDDHEIDMRALDVYSLPPPSPPPPPPPPPPPPPPPPLDDKVTAPFHRGDTVNPSVKKPVSPTFAKSFTIASLQQYTNSFSQENLIGGGMLGNVYRAELPDGKLLAVKKLDKRASEHQKDHEFLELVNSIDRIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEICQPPVVHRNFKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFESGIYTHQSDVYSFGVVMLELLTGHQSYDRTRSRGEQSLVRWAIPQLHDIDALSNMVDPSLNGDYPAKSLSNFADIISQCVQSEPEFRPPMSEVVQYLLDMIRKESHRSGLNED 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0882 915 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 162 390 - -
Lele30g0882 915 MobiDBLite consensus disorder prediction 376 410 - -
Lele30g0882 915 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 703 912 - -
Lele30g0882 915 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 201 899 - -
Lele30g0882 915 MobiDBLite consensus disorder prediction 508 556 - -
Lele30g0882 915 Gene3D Ribonuclease Inhibitor 163 385 IPR032675 -
Lele30g0882 915 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 592 702 - -
Lele30g0882 915 Gene3D Phosphorylase Kinase; domain 1 594 702 - -
Lele30g0882 915 SUPERFAMILY Protein kinase-like (PK-like) 600 899 IPR011009 -
Lele30g0882 915 Pfam Protein tyrosine and serine/threonine kinase 628 899 IPR001245 GO:0004672|GO:0006468
Lele30g0882 915 MobiDBLite consensus disorder prediction 1 23 - -
Lele30g0882 915 MobiDBLite consensus disorder prediction 465 603 - -
Lele30g0882 915 MobiDBLite consensus disorder prediction 561 586 - -
Lele30g0882 915 Gene3D Transferase(Phosphotransferase) domain 1 703 914 - -
Lele30g0882 915 ProSiteProfiles Protein kinase domain profile. 625 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0882 915 MobiDBLite consensus disorder prediction 376 434 - -
Lele30g0882 915 MobiDBLite consensus disorder prediction 465 492 - -
Lele30g0882 915 SUPERFAMILY L domain-like 162 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0882 Lele-ChrLele30 12732515 12739577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0882 156 911 Strubbelig Receptor Gene Family AT4G03390 61.269 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele30g0882 PK_Tyr_Ser-Thr 5.6e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0882 30 12732515 12739577 Lele31g1017 31 17192777 17201688 hybridization
Lele30g0882 30 12732515 12739577 Lele32g0506 32 3164003 3171520 hybridization