Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0876 ATGGGGTGTTGTGTATCCACAAGCAGCCGAAGTACTTGTAGTAGTAGGAGCAATGGCGACACGATCTCTCCATCTTGTTTGGAAGTAGGTTTCTGTGGGCAAAAGAGAACGAGGAGAACATTCTCTGATCATGTCATTGCTCTGCAGAATCTGCCGTCCCTACCTAATAGAATTTTTGCCAATGGAAAGAGCCGAACTTCTTGCATATTCACACAGCAAGGCAAAAAGGGCATCAATCAGGATGCCATGATTGTATGGGAAGACTTTATCTCTGAAGATGTGATATTTTGTGGTGTCTTTGATGGCCATGGTCCATATGGTCATGTTGTTGCACGCAGTGTGAGGGATACCTTGCCGGTAAAACTACTTTCATTTTTGCACTCTTGTGAATCAAAGAGAAATGGTTCAGGCTCAGGCAAAGCTTGTTTCAAGGGGAATACTGATAATGGAGTCTGCGAGAGGGATTGTTCCGCTGAGGATGTAGTGAATTCTGTCTGGAGAGAAGCTTTCATGAAGGCTTATAAGGCAATGGACAAAGAACTTAGGTCCCATCCAAATTTGGACTGCTTCTGTAGTGGCAGCACAGCTGTCACTATAGTGAAGCAGGGTTCGAATCTGTTCATGGGCTACATTGGGGATTCGCGAGCAATCATGGGATCCAAAGACAACAATGATTCCATGGTGGCCATTCAGTTAACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCCGAAAGAATTAAACGGTGCAAAGGCAGGGTATTTGCATTGCAGGATGAGCCCGAGGTTCCCAGAGTGTGGTTGCCTTTTGATGATGCACCCGGATTAGCGATGGCTCGAGCATTTGGTGATTTCTGCTTGAAGGAGTATGGCGTGATTTCCATACCTGAGTTTTCTCATAGACTGCTTACAGACAGAGATCAGTTCATCGTTCTTGCCTCTGATGGGGTGTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTAGCTTCGGCACCGTCTCGTTCATCAGCTGCTAGGATTCTGGTGGATTCTGCGGCTCGGGAGTGGAAGCTTAAGTATCCGACATCAAAGATGGATGACTGTGCTGTTGTGTGCATGTTTTTGGATGGGAAGATGGACTCAGAATCTGATTATGACGAGCCAGGCTTTTCTTCAGCAACCATCCAGAGCAACCATTCTGGCAATCCAGTTGAATCAGACCACGGCCAGAAGTCCGAGCCATCTCTGCATCGGAACTTCACCGTGAGATCTGCTGATGAACATGAGACTTACGGAGGACTGCCGGTGGACGTAGTCTTTGAAGATGGAACAACATCATCAGTGGAAGATCAAAACTGGTCAGGTTTGGAAGGTGTAACCCGTGTAAATTCACTGGTCCAGCTTCCTCGATTTTCCGAGGAAAGGCCGAACACTTGA 1422 0.4669 MGCCVSTSSRSTCSSRSNGDTISPSCLEVGFCGQKRTRRTFSDHVIALQNLPSLPNRIFANGKSRTSCIFTQQGKKGINQDAMIVWEDFISEDVIFCGVFDGHGPYGHVVARSVRDTLPVKLLSFLHSCESKRNGSGSGKACFKGNTDNGVCERDCSAEDVVNSVWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDNNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVASAPSRSSAARILVDSAAREWKLKYPTSKMDDCAVVCMFLDGKMDSESDYDEPGFSSATIQSNHSGNPVESDHGQKSEPSLHRNFTVRSADEHETYGGLPVDVVFEDGTTSSVEDQNWSGLEGVTRVNSLVQLPRFSEERPNT 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0876 473 MobiDBLite consensus disorder prediction 380 410 - -
Lele30g0876 473 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Lele30g0876 473 PANTHER PROTEIN PHOSPHATASE 66 368 - -
Lele30g0876 473 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Lele30g0876 473 CDD PP2Cc 72 370 IPR001932 -
Lele30g0876 473 MobiDBLite consensus disorder prediction 1 20 - -
Lele30g0876 473 FunFam probable protein phosphatase 2C 52 57 373 - -
Lele30g0876 473 MobiDBLite consensus disorder prediction 382 404 - -
Lele30g0876 473 Gene3D - 58 378 IPR036457 -
Lele30g0876 473 SMART PP2C_4 50 368 IPR001932 -
Lele30g0876 473 Pfam Protein phosphatase 2C 142 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0876 Lele-ChrLele30 12694323 12696603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0876 1 473 PP2C-type Phosphatase Gene Family AT1G03590 68.344 0.0 625
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0876 30 12694323 12696603 Lele31g1010 31 17153704 17156027 hybridization
Lele30g0876 30 12694323 12696603 Lele32g0513 32 3210788 3213081 hybridization