LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele30g0873	ATGTTCCGCTCCATCCCTCCGGCGGATGCTGTTTTCATGAATTGGATACTGCACGATTGGCGCGACGAAGACTGCATAAAGATACTGAAGAATTGCAAGACGGCAATAGCAGAAGAGAAAGGGAAGGTGATAATAGCAGAGTTTGTGGTGAGGCCAGATGGAACAGACTTGTTCGACGACATAGGCTTGGTCACCGATTTGCTGATGATTGCACATTCCTCAGGTGGAAAAGAGAGGACCGAATCGGAAAAGAAACAGAGACAGAGAGAGATGGGAGAGAATGCAATGGGAGAGGAGGGGGCTTTGATATTACAGGGTCAAGCTGATATATGGAAGTACATGTTCCACTTCGCAGATTCCATGGCCCTCAAATCCGCAGTGGAGCTCCGCATTCCCGACATTATACACCGCCACGGTGGTCCAATCACCTTGTCCCAGATCGTCGCCGCTCTCTCCGACGCCCCCTCTCCCAACACCGCCTGCCTCGCCCGCATCATGAGGCTCCTTGTCCGCCGCGACATCTTCTCCGCGCATCGCCCATCCGACGTCGGAGACACCCTCTACGGCCTCACCCACTCTTCCCGCTGGCTCTTGAGTGACTCCGCCGTGAACCTAGCGCCCATGCTTCTCATGGAAAACCACCCAACCCTTCTGGCTCCGTGGCACTATCTCAGCCACTGCGTGAGAGAAGGCGGCGTGGCGTTCAAGAAGGCTCATGGGGGAGAGATTTGGGAGATGGCGTCGGAGAACCCAGAATTCAACAAGCTGTTCAATGATGGGATGGCGTCTACGGGTAGGACGGCGATGATGGCGATCTTATTGGCATATAAGGAAGGGTTCGAGAGCATTGGATCGTTGGTTGATGTGGGAGGTGGAACCGGAGGGACGGTGTCGGAGATAGTGAAAGCGTATCCCCACATAAAAGCTATAAACTTTGATCTGCCTCATGTGATCGCCACCGCACCTGAATACGACGGAATCACCCACGTCGGAGGAGACATGTTCCACTCCATCCCTCCCGCTGATGCCGTTTTCATGAAGTGGCTGCTGCATGATTGGAGCGACGAAGAATGCATAAAGGTACTGAAGAACTGCAAGAAAGCGATATCAGAAGAGAACGGGAAGGTGATAATAGAAGAGTTTGTGCTGAAGCCAGAGGGCAAAGGCTTGTTCGACGACATTGGTTTTCTCTTCGACTTGCTCATGATTGCTCATTCCTCCGGCGGAAAAGAGAGGACAGAATCGGAGTGGAAGAATCTCTTAAACCAAGCTGGCTTCTCTCGCTGTCAAATCATCAACACACACTCTTTCTTATCCATCATCGAGGCTCACCCCATCTGA	1341	0.5242	MFRSIPPADAVFMNWILHDWRDEDCIKILKNCKTAIAEEKGKVIIAEFVVRPDGTDLFDDIGLVTDLLMIAHSSGGKERTESEKKQRQREMGENAMGEEGALILQGQADIWKYMFHFADSMALKSAVELRIPDIIHRHGGPITLSQIVAALSDAPSPNTACLARIMRLLVRRDIFSAHRPSDVGDTLYGLTHSSRWLLSDSAVNLAPMLLMENHPTLLAPWHYLSHCVREGGVAFKKAHGGEIWEMASENPEFNKLFNDGMASTGRTAMMAILLAYKEGFESIGSLVDVGGGTGGTVSEIVKAYPHIKAINFDLPHVIATAPEYDGITHVGGDMFHSIPPADAVFMKWLLHDWSDEECIKVLKNCKKAISEENGKVIIEEFVLKPEGKGLFDDIGFLFDLLMIAHSSGGKERTESEWKNLLNQAGFSRCQIINTHSFLSIIEAHPI	446

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele30g0873	446	FunFam	O-methyltransferase family protein	199	444	-	-
	Lele30g0873	446	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	1	90	IPR029063	-
	Lele30g0873	446	Pfam	Dimerisation domain	121	170	IPR012967	GO:0046983
	Lele30g0873	446	Gene3D	-	94	197	IPR036388	-
	Lele30g0873	446	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	111	445	IPR016461	GO:0008168
	Lele30g0873	446	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	1	112	IPR016461	GO:0008168
	Lele30g0873	446	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	203	443	IPR029063	-
	Lele30g0873	446	PANTHER	O-METHYLTRANSFERASE	1	86	IPR016461	GO:0008168
	Lele30g0873	446	Gene3D	Vaccinia Virus protein VP39	199	444	IPR029063	-
	Lele30g0873	446	Pfam	O-methyltransferase domain	221	427	IPR001077	GO:0008171
	Lele30g0873	446	Pfam	O-methyltransferase domain	1	85	IPR001077	GO:0008171
	Lele30g0873	446	SUPERFAMILY	"Winged helix" DNA-binding domain	101	201	IPR036390	-
	Lele30g0873	446	Gene3D	Vaccinia Virus protein VP39	2	85	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele30g0873	Lele-ChrLele30	12662495	12668848	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele30g0873	1	92	Monolignol Biosynthesis Gene Families	AT5G54160	46.809	7.00e-19	85.9