Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0864 ATGGCGACAGGGGCCATTGTAGAGCTTCATAGAAACTCCGGCGACTGGGATAAGATAGTGGCAGAGATTGTGAAATTGGAGAGAAAAATATTTCCCAAACACGAATCACTTGCTACGTTCTTCGACCAAGAACTGAGAAAGAAGAACTCTGGATTGCTTTACCTCGACGTGGATGGAGAAGTTGTAGGCTATGCCATGTATTCTTGGCCTTCTTCCTTGTACGCCTCTATCACAAAGCTGGCAGTGAAGGAGCAATGGAGGAGACAAGGGCTTGGGGAGATTCTGCTGAAGGCAGCAATAGAGAAATGCAGAACAAGGAAAATCTCGCGCATATTGCTTCATGTTGATCCCACGAGGATTCCAGCCTTGACACTTTACAGGAAGCAAGGTTTCCAGGTTGACACTTTGATCGAAGGATACTACTCTTCTGATCGAAGTGCCTATAGAATGTACTTGGATTTGGACGCCAATTAA 474 0.4557 MATGAIVELHRNSGDWDKIVAEIVKLERKIFPKHESLATFFDQELRKKNSGLLYLDVDGEVVGYAMYSWPSSLYASITKLAVKEQWRRQGLGEILLKAAIEKCRTRKISRILLHVDPTRIPALTLYRKQGFQVDTLIEGYYSSDRSAYRMYLDLDAN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0864 157 Pfam Acetyltransferase (GNAT) family 23 131 IPR000182 GO:0016747
Lele30g0864 157 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 7 155 IPR000182 GO:0016747
Lele30g0864 157 Gene3D - 14 154 - -
Lele30g0864 157 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 154 IPR016181 -
Lele30g0864 157 CDD NAT_SF 55 114 - -
Lele30g0864 157 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0864 Lele-ChrLele30 12612288 12613036 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele30g0864 Acetyltransf_1 7.2e-18 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0864 30 12612288 12613036 Lele32g0525 32 3289378 3290125 hybridization