Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0846 ATGACCTCACTTGTTGCTCTTCTCTACCTTATCATCGCCCTTCTTCACTTGACAACTACACTGAGCTCTGTGTCTGCAACTGAATTTGTCTACAACACAAACTTCAAATCTTCTAACATCTTCCTCTGTGGAAACTCTTCTATTCAGTCATCTATTCTGGTTCTTACCAATCGAAGTTTCTTCTCCATAAACCGAGCTTTTTACCCTTACAAAATACCCACTAAAGCAGCTAACTCTTCTTCTACCCTTCTTCCCTTTGCAACTTCCTTCATTTTCTCTATTGCTCCCATTAAGCATTTTCTCACTGGTCATGGCTTCGCTTTCATTTTCTCACCTACTAGGGGCTTCAACGGCACGACCTCATCTCAGTACATTGGCTTCTTGAATTTCACTAATCAAGGTAATCCTCAGAACCATGCTTTTGGAGTTGAGTTTGATGTCAGAAAAAATGTAGAATTCAATGACATAAACGACAATCATGTTGGCATAGACATAAACTCTCTTACTTCCTTAACTTCACATGATGCTGGTTATTGGGGTGGGAAAAATGATAAGGAATTCAAGCGGTTCAAGTTAAACAATGGAGTCAATTACCAGGTCTGGATTGAGTTTATAGATTCACAGCTTAATATCACAATGGGTCAAGCAGGAAGAAAAAGACCCAAAAAACCTCTGATTAGTCAGAATGTTAATCTTTCAGAGGTTTTCTTAGATCAAATGTATGTTGGATTTTGTGCATCGACTGGTCTATTGATGGACACTACTAGAATCATGGCTTGGAGTTATAGTAATTCAAATTTTTCAATAGGTGATGCTTTGATCACAGCCGATCTGCCTTCATTTGTGCATCAGAAAGGTTTTTTTTCCGGATCAAGATCTCCGGTTATAGGCTTAGTTCTTGTCTGCATGGTTCTCATTGTCTGTGTTTCTCTGGGGTGCTTCATTTTATGGAGAGGTATATGCAAATCAGAGGAAGATTTAGAAGAATGGGAGTTAGAGTATTGGCCCCATAGGATTAATTACCAAGAGATCATTGCTGCAACAAGTGGGTTCTCAGAAGAGAAGGTGATAGGAATAGGAGGGAATGGAAAAGTATATAAAGGAGTTTTGCACGGAGAAGAAGTTGCAGTCAAGAGAATCTCTCATGAAACAGAATCAGGAATAAGAGAGTTCTTGGCTGAAATTTCAAGCTTAGGCAGACTGAAACACAGAAATCTGGTGAACTTCAGAGGTTGGTGCAAAAGAGAAAAGGGAAGTTTCATATTAGTCTATGATTACATGGAGAATGGAAGTTTAGACAAATGGATCTTTGAAAGTGAGGAAGAAGAAGATAGAAGAAAGATGATGACTTGGGAAGAGAGGATTCAAGTTCTAAAGAATGTAGCCTCTGGGATTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGAGACATCAAATCCAGCAATGTTCTGCTCAACAAAGACATGAACGCGAGATTGGGAGATTTCGGATTGGCTCGCATGCATGATCATCATGGGCAGATAGCAACCACAACAAAAGTGATTGGAACTATAGGGTACATAGCCCCGGAAGTGATCAAATCAGGAAGAGCATCAACACAATCTGATGTTTTTGGTTTTGGAATATTAGTTTTAGAAGTGGTTTGTGGGAGAAGACCAATTGAAGAAGGTAAGCCAGGGTTGATTGAGTGGTTAATGTCTCTAATGGAGATTGATGAGTTACACTGTGCTCTTGATGAGAGGTTGAAGGCCCAAGGAGGATTTGTCATTGAGGAAGTTGAAAGAATGCTTCGTTTGGGTTTGCTTTGTGCAAATTTTGACCCTAATGTTAGGCCTATAATGAGGCAAGTGGTTAATATGCTGGAAGGAGAATTTGAAGGAAATGAGACAGAACAGAACGGTAAGGGAGAGAATTTGCTCGAGAAAATAAAATCAGCAGCAATGTGGTCTGAAACCGCTCAAGCCTTTTCTAACATAAGACACCCAACATTTGATGACTTGATGTTTAGTTCTTATTCTAAAACTTCTGCAAGTAACTCGTACGCCATCCCAGATTCAGAGATCATCCTAGAAGAAGGAAGATAA 2094 0.3968 MTSLVALLYLIIALLHLTTTLSSVSATEFVYNTNFKSSNIFLCGNSSIQSSILVLTNRSFFSINRAFYPYKIPTKAANSSSTLLPFATSFIFSIAPIKHFLTGHGFAFIFSPTRGFNGTTSSQYIGFLNFTNQGNPQNHAFGVEFDVRKNVEFNDINDNHVGIDINSLTSLTSHDAGYWGGKNDKEFKRFKLNNGVNYQVWIEFIDSQLNITMGQAGRKRPKKPLISQNVNLSEVFLDQMYVGFCASTGLLMDTTRIMAWSYSNSNFSIGDALITADLPSFVHQKGFFSGSRSPVIGLVLVCMVLIVCVSLGCFILWRGICKSEEDLEEWELEYWPHRINYQEIIAATSGFSEEKVIGIGGNGKVYKGVLHGEEVAVKRISHETESGIREFLAEISSLGRLKHRNLVNFRGWCKREKGSFILVYDYMENGSLDKWIFESEEEEDRRKMMTWEERIQVLKNVASGILYLHEGWEVKVLHRDIKSSNVLLNKDMNARLGDFGLARMHDHHGQIATTTKVIGTIGYIAPEVIKSGRASTQSDVFGFGILVLEVVCGRRPIEEGKPGLIEWLMSLMEIDELHCALDERLKAQGGFVIEEVERMLRLGLLCANFDPNVRPIMRQVVNMLEGEFEGNETEQNGKGENLLEKIKSAAMWSETAQAFSNIRHPTFDDLMFSSYSKTSASNSYAIPDSEIILEEGR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0846 697 SMART serkin_6 351 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0846 697 CDD lectin_legume_LecRK_Arcelin_ConA 27 265 IPR001220 GO:0030246
Lele30g0846 697 ProSitePatterns Protein kinases ATP-binding region signature. 357 378 IPR017441 GO:0005524
Lele30g0846 697 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 316 426 - -
Lele30g0846 697 Gene3D Transferase(Phosphotransferase) domain 1 427 650 - -
Lele30g0846 697 FunFam L-type lectin-domain containing receptor kinase V.9 25 272 - -
Lele30g0846 697 FunFam L-type lectin-domain containing receptor kinase S.4 427 637 - -
Lele30g0846 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 265 IPR013320 -
Lele30g0846 697 ProSiteProfiles Protein kinase domain profile. 351 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0846 697 Gene3D - 25 270 - -
Lele30g0846 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Lele30g0846 697 Pfam Legume lectin domain 27 266 IPR001220 GO:0030246
Lele30g0846 697 Pfam Protein kinase domain 352 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0846 697 SUPERFAMILY Protein kinase-like (PK-like) 328 625 IPR011009 -
Lele30g0846 697 Gene3D Phosphorylase Kinase; domain 1 319 426 - -
Lele30g0846 697 CDD STKc_IRAK 357 626 - -
Lele30g0846 697 PANTHER - 44 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0846 Lele-ChrLele30 12537910 12540003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0846 24 573 Receptor kinase-like Gene Family AT4G04960 58.094 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele30g0846 Pkinase 4.3e-47 CL0016