Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0845 ATGTCTTCCCCGCTCATCTTTCTCTTTTTCATCCAAATCCTTCTCGTCCTTAGCTCAGCTTTAGCTACTGAATTTATCTACAACACCAACTTCAGCTCTGCCAACATCCTTCTCTCCGGCAATGCTTCCATTGATTCTCGCATTCTCACCCTTACCAACCACGCCTCCTTCTCCGTGGGTCGAGCTTTTTACCCTTTTAAAATACCCACAAAACCTTCTAATTCTTCTTCTCCTTTACCATTTTCAACCTCCTTCATTTTCTCTATTGCTACTTTCAAAGGCCTCCTCCCTGGACATGGATTCGTATTCATTCTCTCTCCTTTTACAGGAACAAAGGGAGTAAGCTCTGCCCAGCATTTGGGTCTCTTCAATTTCAGCAATGACGGTAATCCCGACAACCATGTTTTTGGTGTTGAATTTGATGTGTTCAAGAACCAAGAGTTTAATGATATCAATGATAATCATGTGGGTGTGGATATAAATTCCCTTACTTCTTTTAGTTCTCATGCTGCGGGTTCTTGGGTTGGGAAAGATGATAGGGAGTTTGAGGATTTGAAACTCAATGACGGGGATAACTATCAAGTGTGGATTGAATATCTGGATTCTAGACTTAATGTAACTATGGCTCGTGTAGGACGAAAGAGGCCTCGGAGACCTTTGATTAGTGAGCTTGTTAATCTTTCTTCGGTTCTTTTGGATGAAATGTACGTGGGATTTTGTGGGGCAACAGGGCAACTGGTAGAGAGTCATAAAATTTTGAGTTGGAGCTTTAGTAATTCCAATTTTTCAATTGGCGATGCTTTAGTGACTTCAAATTTGCCTTCATTTGTACTTCCTAAAAGATCAGTTATGAAGTCAAAAGGTTTTATTATAGGAATCAGTATGGGTGTCTTCTTTGTCATTGGCATTGCCACTGTAATATTTGCACGTTTTCTCAGAAGGAAAACTAGCAAAAGAAATGAGGAAGAAGACACTGAAGATTGGGAATTAGAGTATTGGCCACACCAAATACGTTATGAAGATATTTATGCTGCCACTAAAGGATTTTCAGACCAAAATGTGATTGGGTTTGGAGGGAATGGGAAAGTCTATATAGGGGTTTTACACGATGTAGAAGTTGCAGTAAAAAGAACCCCTTATGAGAGTGAGAAAGGCATGAGGGAATTTTTGTCTGAAATTTCAAGTTTAGGAAGATTGAAGCACAGGAATGTGGTGCCATTGAGAGGTTGGTGTAAGAAAGAGAGAGGAAGTTTGATTTTAGTCTATGATTATATGAGCAACGGAAGTTTAGACAAAAGGATATTTGATGTTGATGATGAGAACAAAATTTTGACATGGGAGGAAAGAATCAAGGTGTTGAAGGACGTAGCTCATGGATTATTGTATTTGCATGAAGGTTGGGAAGTTAGTGTCTTGCATAGAGATATCAAAGCAAGCAATGTATTGCTTGATAAGGATATGAATGCGAGGTTGGGCGATTTCGGATTAGCTCGAATTTGTCATCACGGGCAGCCAACTAATACGACTCAAGTGATTGGGACAGTTGGGTACATGGCACCTGAACTAGTTCAAAGAGGGAGAGCCTCCACTCATACTGATGTATTCAGTTTTGGTGTGTTGATTTTAGAGGTGGTTTGTGGGAGAAGACCAACGGAACAAGATAAGCCAGGTTTGGTTTCCTGGCTCTGGAGGCTAATGGAGAGAGGAGAACTATATGATGCTCTTGATGAACATTTAAAGTGGATGAGAGATCACGACACCGATGAAGCTGAACGGGTTCTTCATCTTGGTTTGTTGTGCACACTGCCTGATCCTTGTGCTAGGCCTACTATGAGACAGGTTATGAAGGTGTTGGAAGAAGATAGGATGGATCTGAGCTTGATTGAAAAGTTAAATTCTGCTGCCACCTCTGCAGTAGAAGCTGGAAGCTTCAATTACGGCATTCACCCGTCAGTCGAGGAAATTTCCCGGTCCCATTTCTCTTTCACAACTCAGGCCGGTCGATGA 2007 0.4131 MSSPLIFLFFIQILLVLSSALATEFIYNTNFSSANILLSGNASIDSRILTLTNHASFSVGRAFYPFKIPTKPSNSSSPLPFSTSFIFSIATFKGLLPGHGFVFILSPFTGTKGVSSAQHLGLFNFSNDGNPDNHVFGVEFDVFKNQEFNDINDNHVGVDINSLTSFSSHAAGSWVGKDDREFEDLKLNDGDNYQVWIEYLDSRLNVTMARVGRKRPRRPLISELVNLSSVLLDEMYVGFCGATGQLVESHKILSWSFSNSNFSIGDALVTSNLPSFVLPKRSVMKSKGFIIGISMGVFFVIGIATVIFARFLRRKTSKRNEEEDTEDWELEYWPHQIRYEDIYAATKGFSDQNVIGFGGNGKVYIGVLHDVEVAVKRTPYESEKGMREFLSEISSLGRLKHRNVVPLRGWCKKERGSLILVYDYMSNGSLDKRIFDVDDENKILTWEERIKVLKDVAHGLLYLHEGWEVSVLHRDIKASNVLLDKDMNARLGDFGLARICHHGQPTNTTQVIGTVGYMAPELVQRGRASTHTDVFSFGVLILEVVCGRRPTEQDKPGLVSWLWRLMERGELYDALDEHLKWMRDHDTDEAERVLHLGLLCTLPDPCARPTMRQVMKVLEEDRMDLSLIEKLNSAATSAVEAGSFNYGIHPSVEEISRSHFSFTTQAGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0845 668 ProSiteProfiles Protein kinase domain profile. 349 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0845 668 Gene3D Transferase(Phosphotransferase) domain 1 425 633 - -
Lele30g0845 668 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 311 424 - -
Lele30g0845 668 Pfam Legume lectin domain 23 261 IPR001220 GO:0030246
Lele30g0845 668 PANTHER - 39 621 - -
Lele30g0845 668 FunFam L-type lectin-domain containing receptor kinase S.4 425 630 - -
Lele30g0845 668 CDD STKc_IRAK 355 620 - -
Lele30g0845 668 Pfam Protein kinase domain 350 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0845 668 CDD lectin_legume_LecRK_Arcelin_ConA 23 253 IPR001220 GO:0030246
Lele30g0845 668 FunFam L-type lectin-domain containing receptor kinase S.4 21 265 - -
Lele30g0845 668 Gene3D - 22 269 - -
Lele30g0845 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 262 IPR013320 -
Lele30g0845 668 ProSitePatterns Protein kinases ATP-binding region signature. 355 376 IPR017441 GO:0005524
Lele30g0845 668 Gene3D Phosphorylase Kinase; domain 1 310 424 - -
Lele30g0845 668 SMART serkin_6 349 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0845 668 SUPERFAMILY Protein kinase-like (PK-like) 326 619 IPR011009 -
Lele30g0845 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0845 Lele-ChrLele30 12533010 12535016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0845 22 569 Receptor kinase-like Gene Family AT4G04960 60.073 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele30g0845 Pkinase 7.5e-47 CL0016