Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0843 ATGTCCCAAATACCCCACACACCCACACCCACACAGATATCTATATATATAGAATCACGCAAACATTATAAGCCAACACAAATAAATTCAACCAGCAATATCATCTTCGAAGAACCAGGAACTATAATGGAAACTCAAGGAAGCCATAATCAGCCTCCTCCTCCTTCTCCTTCCACCAAAGTCGAAAGAAAAATCATAGAGAAAAACAGAAGAAACCAGATGAAGATCCTCTACTCTAAGCTCAATTCTCTCCTTCCTAACCATAACCCCAAGGAAATACTGCCACTTCCTGATCAGATAGATCAGGCGATAAACCACATAAATAATTTGGAGGCGAGGTTGAAGATGGCTCAAGAGAAGAAAGATAGCTTGACGGGAAAGAAGAGATCATTTGCTAGCTGCTCGACAAGCAGCAGTGTTCTTGGGACTAATAAAACTGTGGCGAGATCACCTGAACTTGAGATTCGTGAAGTGGGTTCGTCTCTAGAAGTTGTTCTGATCACTGGATTAGATAACCAGTTCGTTTTCTATGAGATCATTCGCATGCTCCATGAAGAGAACGTTCAGGTCGTGAGTGCTAATTCCTCGCTTGCTGGCGATTCAATGCATCACGTAGTGCATGCAGAGATTGGGCAATCGACGTTTCAATTTGGAGCAACAAAGGTAAGCGAGAGGCTAAAAAGATTTGTGTATGGATCATCAAGTGATGTGGAAATAAACCCATCAGAGTTGTGGGATTTTGACAATATTAATGCTTCTGATCCCTGGAGCTTCTAA 777 0.4196 MSQIPHTPTPTQISIYIESRKHYKPTQINSTSNIIFEEPGTIMETQGSHNQPPPPSPSTKVERKIIEKNRRNQMKILYSKLNSLLPNHNPKEILPLPDQIDQAINHINNLEARLKMAQEKKDSLTGKKRSFASCSTSSSVLGTNKTVARSPELEIREVGSSLEVVLITGLDNQFVFYEIIRMLHEENVQVVSANSSLAGDSMHHVVHAEIGQSTFQFGATKVSERLKRFVYGSSSDVEINPSELWDFDNINASDPWSF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0843 258 FunFam Transcription factor bHLH162 49 136 - -
Lele30g0843 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 110 IPR011598 GO:0046983
Lele30g0843 258 Gene3D - 54 136 IPR036638 GO:0046983
Lele30g0843 258 Pfam Helix-loop-helix DNA-binding domain 60 111 IPR011598 GO:0046983
Lele30g0843 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 130 IPR036638 GO:0046983
Lele30g0843 258 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 56 231 IPR015660 -
Lele30g0843 258 Coils Coil 100 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0843 Lele-ChrLele30 12510693 12511666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0843 58 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 38.202 3.09e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele30g0843 HLH 4.6e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0849 11 8503417 8511101 Lele30g0843 30 12510693 12511666 CCT
Lele12g0494 12 13083301 13091236 Lele30g0843 30 12510693 12511666 CCT
Lele09g0846 09 6711917 6712622 Lele30g0843 30 12510693 12511666 CCT
Lele30g0843 30 12510693 12511666 Lele32g0546 32 3385064 3386085 hybridization