Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0840 ATGGCGTCTGAACCACACAGATTAATGCTCGAACTGTTTCTTCCCATGACTGTTACGTTGCTGCTTTGCTTTTCATCATCATCCCAAGCTTTGAAATTCAACATTGGTGGCAAAGATGGCTGGGTTGTGAAGCCTTCTGAAGATTATTACAATCACTGGGCTGAAAGGAATAGGTTTCAAGTCAATGATACGCTCTATTTCAAGTATAAGAAAGGGTCTGATTCGGTTCTAGTGGTGAACAAGACGGATTACGATTCCTGCAACACCAAGAATCCCATGAAGAAGATGAACGACGGTGATTCTTACTTCACCTTCGATAAATCGGGCCCTTTCTTCTTTATCAGTGGCAATTCTGGAAAGTGCAAAAAGGGTCAGAAGCTTATCGTCGTCGTCTTGGCTGTCCGGCACAAGACTCCTACTGGTTCACCTCCGACGACGGCTGCTCCGTCTCCGTCTCCAGCAGGTGGGAGTTTTCCCCCTGCCATGTCGCCGGGGAGTTTGTCACCTCGGCCAAGTGAGGGACCAAATGCCGGTGACAACTCTCCGGCGCCGTCGCAGTCTCTTCCTTCGGGTTCTACGAGGTTTGGGGGTTCTGTTAGGGTGGTGGGGATGGGGGTGTTACTGGGTTGCTTCGTTGGGATTGTTTGA 648 0.4954 MASEPHRLMLELFLPMTVTLLLCFSSSSQALKFNIGGKDGWVVKPSEDYYNHWAERNRFQVNDTLYFKYKKGSDSVLVVNKTDYDSCNTKNPMKKMNDGDSYFTFDKSGPFFFISGNSGKCKKGQKLIVVVLAVRHKTPTGSPPTTAAPSPSPAGGSFPPAMSPGSLSPRPSEGPNAGDNSPAPSQSLPSGSTRFGGSVRVVGMGVLLGCFVGIV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0840 215 Gene3D - 31 143 IPR008972 -
Lele30g0840 215 FunFam Early nodulin-like protein 1 30 136 - -
Lele30g0840 215 ProSiteProfiles Phytocyanin domain profile. 31 133 IPR003245 GO:0009055
Lele30g0840 215 PANTHER BLUE COPPER PROTEIN 31 147 IPR039391 GO:0009055
Lele30g0840 215 MobiDBLite consensus disorder prediction 139 192 - -
Lele30g0840 215 SUPERFAMILY Cupredoxins 30 132 IPR008972 -
Lele30g0840 215 MobiDBLite consensus disorder prediction 144 158 - -
Lele30g0840 215 Pfam Plastocyanin-like domain 46 125 IPR003245 GO:0009055
Lele30g0840 215 MobiDBLite consensus disorder prediction 169 192 - -
Lele30g0840 215 CDD OsENODL1_like 32 132 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0840 Lele-ChrLele30 12499094 12499837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0840 8 185 Phytocyanin Superfamily AT4G28365 47.753 6.08e-49 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0840 30 12499094 12499837 Lele31g0976 31 16955084 16955782 hybridization
Lele30g0840 30 12499094 12499837 Lele32g0547 32 3388819 3396166 hybridization