Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0834 ATGCACGGCAGAGAAATCCTTCAGAAAATTAAGGTGAAAGCATTTGGAACATCAGGAGGTGAAAGAGGGAAAGGGAAAAGCAAAATGTCAAAGAACAAAACACATGGATTTCACTTGGTGAAGGGGAAATCAGCTCATGCCATGGAAGATTATATAGTTTCAAAATTCAAGCAAGACGAGGACAAGGAATTAGGTTTATTTGCAATATTTGATGGTCATTTAGGCCATGATGTTGCAAGCTATTTGCAGAACAACCTTTTCGACAACATCCTAAAACAGGAAGACTTCTGGACTGATGCAGAAAGTGCAGTGAAGAGAGCTTACCTTATAACGGACGACAAAATATTAGAACAATCATTTGAGTTAGGACGAGGAGGATCAACCGCTGTAACTGCAATACTGATAAATGGTCAGAAACTTGTAGTAGCAAACGTTGGAGACTCTCGAGCTGTTATCAGCAAGAATGGTAAGTCCAAGCAGCTTTCCATTGATCACGAGCCAAGCAAGGAGAAAAAGATGATTGAGAGCCGTGGTGGTTTTGTCTCAAACATTCCAGGAGACGTGCCTCGTGTAGATGGAAAGCTGGCGGTAGCGAGGGCTTTTGGTGATAAGAGTTTAAAGATGCATCTTAGTTCTGAACCTGATGTGGTTGTACAGAATGTTGAAGGCACAGAGTTCCTTATTTTGGCAAGTGATGGAATCTGGAAGGTGATGTCAAACCAAGAAGCGGTGGATTGTATCAGGAAGACAAAGGATGCACAGGCTGCAGCGAAGCGGTTGATAGAAGAAGCCGTTGCAAGGAACAGTAAGGATGACATATCCTGTATCATTGTCAATTTCCAATAA 846 0.4208 MHGREILQKIKVKAFGTSGGERGKGKSKMSKNKTHGFHLVKGKSAHAMEDYIVSKFKQDEDKELGLFAIFDGHLGHDVASYLQNNLFDNILKQEDFWTDAESAVKRAYLITDDKILEQSFELGRGGSTAVTAILINGQKLVVANVGDSRAVISKNGKSKQLSIDHEPSKEKKMIESRGGFVSNIPGDVPRVDGKLAVARAFGDKSLKMHLSSEPDVVVQNVEGTEFLILASDGIWKVMSNQEAVDCIRKTKDAQAAAKRLIEEAVARNSKDDISCIIVNFQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0834 281 SUPERFAMILY PP2C-like 32 280 IPR036457 -
Lele30g0834 281 FunFam Probable protein phosphatase 2C 39 24 281 - -
Lele30g0834 281 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Lele30g0834 281 SMART PP2C_4 26 278 IPR001932 -
Lele30g0834 281 Gene3D - 28 281 IPR036457 -
Lele30g0834 281 Pfam Protein phosphatase 2C 46 273 IPR001932 -
Lele30g0834 281 PANTHER PROTEIN PHOSPHATASE 27 280 - -
Lele30g0834 281 CDD PP2Cc 35 280 IPR001932 -
Lele30g0834 281 SMART PP2C_SIG_2 39 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0834 Lele-ChrLele30 12456026 12457780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0834 23 281 PP2C-type Phosphatase Gene Family AT4G28400 75.000 1.31e-144 404