Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0831 ATGGCTGTGAAGGAGAAGCTCGGTATCAAGCACACCAAGCCAAACATTGCCAAGGAGGTTCACTACAGAGGCGTCCGCAAGAGGCCCTGGGGACGTTACGCCGCCGAAATACGAGATCCTGGCAAGAAGAGCCGAGTTTGGCTTGGCACCTTCGACACGGCGGAGGAAGCTGCAAAAGCCTACGACACCGCCGCCCGGCAATTCCGTGGCCCCAAGGCTAAGACTAACTTTCCTCTGCCCAACGAGAGCGGTCCCCACGGAAATAACAAGAGCCCAAGCGAGACCAGCACCGTGGAGTCATCCAGCCGAGAAGGCTCGGAGCGTGAGATAACGCGCCACTGTGACGTTGGAGTTGTTGTGGATCGGTTCCCGTTTCTCCCGATTAAGCCACACCACATGGCGTTTGGTTGCAGCGGTGGTGGTGGGGTGGCGGGTTTAGTGCCATCAGCTGTGCGTCCGGTTTTCTTTTTTGAACCAGGGGTAGGTGGTAGGGCCGAGTTTGTGGGTCAGCCATATCCGTTGCCGGTCGACGCAACGACCCAAATGAGAAGTGCGGCTTCGAGTGACTCCGATTCGTCCTCCGTCGTTGATGGTCAACCTAAGAAAGCTGTCAATCTTGATCTTAACCTGGCCCCTCCATCAGACGGCTGA 651 0.5714 MAVKEKLGIKHTKPNIAKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAARQFRGPKAKTNFPLPNESGPHGNNKSPSETSTVESSSREGSEREITRHCDVGVVVDRFPFLPIKPHHMAFGCSGGGGVAGLVPSAVRPVFFFEPGVGGRAEFVGQPYPLPVDATTQMRSAASSDSDSSSVVDGQPKKAVNLDLNLAPPSDG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0831 216 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 197 - -
Lele30g0831 216 MobiDBLite consensus disorder prediction 180 216 - -
Lele30g0831 216 MobiDBLite consensus disorder prediction 64 109 - -
Lele30g0831 216 MobiDBLite consensus disorder prediction 180 199 - -
Lele30g0831 216 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Lele30g0831 216 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Lele30g0831 216 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Lele30g0831 216 MobiDBLite consensus disorder prediction 81 100 - -
Lele30g0831 216 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Lele30g0831 216 CDD AP2 21 78 IPR001471 GO:0003700|GO:0006355
Lele30g0831 216 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Lele30g0831 216 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Lele30g0831 216 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Lele30g0831 216 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0831 Lele-ChrLele30 12425992 12426642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0831 8 213 AP2-EREBP Transcription Factor Family AT5G44210 47.867 1.92e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele30g0831 AP2 5.9e-15 CL0081