Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0821 ATGCTTGCGGTGTCAACTTTGAGGGCAACCAAAGATGATATTAAAAGCAGCCAAGGAGAGAATATGGTGGGTGGTTTCTCATCGTCAATCGTCGGTGAAGATGACGGTTTTGGAGAATTTTGCGATGGGAATTTATTGGAGAGCATCAATTTTGACGATCTTTTTGTCGGCATCAACGTGGACGATGCCGGAGATGAGTCCTTGCAGGATTTGGAGATGGGCCAGGAAATCCTCTCCGAGTTCTCCATGGAGTCGTCGGAGATCATGAACTCGTCGACCTCGCTTTCAGTGGAAAATAATGATAATAGATCAGCTGATCAACACCAGACCAGTATTATTACAACTGGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGGTTGTAACAATAAAGTTTCTTCAGCTTGGGATTCAAATTCTGGGTCAAGTCAAGCAGAAAAAGTAGAGATAGTGAACAAACGAGATGAATCTGCGACGACGACGACGAAGAAGTTGAAGCCATGGACGAAGGAAGGTGAGCAAAAGGGAAGAAAATCATCATCAGGCCATCTATCAAAAAATTCACAAGGGAAGAGAAAGGTGAAGGTGGATTGGACCCCAGAATTGCACAGACGATTCGTGCAAGCAGTGGAGCAGCTTGGAGTGGACAAAGCAGTTCCTTCCAAAATCTTAGAGATTATGGGAATTACTTGTCTAACTCGCCACAACATCGCCAGCCACCTCCAAAAATATCGATCGCATAGGAAGCATGTGCTGGCGCGTGAAGCAGAAGCAGCGAGGTGGAATAATAAGAGGAGAGAGGGATTTGGATCACCAGTCCCTGGCATCCCACCACCCCACGGCATGTTCACGGCAGATCCCGACATCGGATCTCCAACCGGACAACCTGCCCGCCCATGGCCCGGCTTTGACTTCCACCCGTCGAATGAAAGCATAGATGCAGCTCTTGGAGATGTTTTATCAAAACCATGGCTTCCACTTCCTCTGGGCCTTAAAGCCCCGGCTCTTGACAGTGTGTTGAGTGAATTACAGAGACAAGGAATCCCCAAGATTCCTCCCTCTTGTGCTCGAGCTTGA 1092 0.4817 MLAVSTLRATKDDIKSSQGENMVGGFSSSIVGEDDGFGEFCDGNLLESINFDDLFVGINVDDAGDESLQDLEMGQEILSEFSMESSEIMNSSTSLSVENNDNRSADQHQTSIITTGKEEEEEEEEEEEEEEGCNNKVSSAWDSNSGSSQAEKVEIVNKRDESATTTTKKLKPWTKEGEQKGRKSSSGHLSKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSKILEIMGITCLTRHNIASHLQKYRSHRKHVLAREAEAARWNNKRREGFGSPVPGIPPPHGMFTADPDIGSPTGQPARPWPGFDFHPSNESIDAALGDVLSKPWLPLPLGLKAPALDSVLSELQRQGIPKIPPSCARA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0821 363 FunFam Two-component response regulator 194 257 - -
Lele30g0821 363 Gene3D - 195 256 - -
Lele30g0821 363 MobiDBLite consensus disorder prediction 136 152 - -
Lele30g0821 363 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 252 IPR006447 GO:0003677
Lele30g0821 363 MobiDBLite consensus disorder prediction 153 185 - -
Lele30g0821 363 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 270 IPR044825 GO:0003700|GO:0045893
Lele30g0821 363 MobiDBLite consensus disorder prediction 1 24 - -
Lele30g0821 363 Pfam Myb-like DNA-binding domain 201 250 IPR001005 -
Lele30g0821 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 254 IPR017930 -
Lele30g0821 363 MobiDBLite consensus disorder prediction 117 132 - -
Lele30g0821 363 MobiDBLite consensus disorder prediction 89 200 - -
Lele30g0821 363 MobiDBLite consensus disorder prediction 10 24 - -
Lele30g0821 363 Coils Coil 116 136 - -
Lele30g0821 363 MobiDBLite consensus disorder prediction 89 112 - -
Lele30g0821 363 SUPERFAMILY Homeodomain-like 196 255 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0821 Lele-ChrLele30 12379365 12382424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0821 38 304 G2-like Transcription Factor Family AT5G44190 37.762 1.17e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele30g0821 Myb_DNA-binding 1.2e-08 CL0123