Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0820 ATGGGAAGCTGCAAGCCAGTGGCTCTGTGGCGGGGTTCGCCTTTCGCTGTATTGGCTGCGCTTTTATCCATTATCGCTGCTGTTATCTGGCTCCTCGGGACAATGCTTCTCGATCCATCATTCCTTCCTTTTCTTTTGGTCTTAGATAATAGTTTTGATCTGATGAATTCTTCTTCTTCTTCTTCTTCAAACTATGTTATAGTTTCGCTTATATTCCAAGGCTTTCGGTCTCACCAGCCTTCCGATGGCAATTCTGAAATGATTGAGAAGCTGAAGAAGAGAAAGAGCGCCGAGGAACACGATTCGAACATGGGTGTGGATTATTACAAGATCTTGCAGGTTGACAAAAATGCCAAAGACGACGACTTGAAGAAGGCTTACAGGAAGCTTGCCATGAAATGGCATCCTGATAAGAACCCCAATAACAAGAAAGAAGCTGAAGCTAAATTCAAGCAGATATCTGAAGCCTATGACGTTCTCAGTGATCCTCAAAAGAGAGCCGTCTATGATCAATATGGTGAAGAGGGTCTGAAGGGTGGGGTTCCGCCCCCCGATGCTGGAGGAGCTGGAGGGGCTTCTTTCTTTTCAACGGGAGAAGGACCGACGTCGTTTCCGTTCAATCCCAGGAACGCCGACGACATTTTTGCAGAATTTTTTGGGTTTTCGAGCCCATTTGGAGGCGCTGGTGGGTATGGAGGGATGAGGTCGTCGAGGTTCTCTAGTGGGATTTTTGGTGATGATATGTTTGGATCATATGGAGAAGGGAGGGGAGTCCATATGCATCCAGGTGCTCCTCGAAAAGCTCCTCCTATTGAGAACAGATTGCCATGTAGTCTCGAAGACTTGTATCAAGGAACTACTAAGAAGATGAAGATCTCTAGAGAAATTGCTGATGCTAGTGGTAAAACCATGCCTGTAGAGGAGATCCTAACTATCAATATCAAACCTGGTTGGAAGAAGGGTACAAAGATAACCTTCCCAGAGAAGGGAAATGAGCGGCCAAATGTGACCCCCGCTGACCTTGTTTTCATCATCGATGAAAAGCCTCACAGTGTTTTCACTCGCGATGGAAATGATCTGGTTGTGACGCAAAAGATTTCTCTCGCAGAGGCCTTGACTGGTTATACGGTGCAGCTGACTACCTTGGATGGAAGAAACCTGACCATACCAATCAACAATGTGATTCATCCAAGCTATGAGGAGGTTGTTCCAAGAGAAGGGATGCCACTCCAAAAGGATCCCACAAAGAAGGGAAACTTAAGGATAAAGTTCAACATTAAGTTCCCTGCTCGGCTGACATCAGAGCAGAAGGCAGGAATCAGGAAACTCTTGGGTGCCTAA 1341 0.4616 MGSCKPVALWRGSPFAVLAALLSIIAAVIWLLGTMLLDPSFLPFLLVLDNSFDLMNSSSSSSSNYVIVSLIFQGFRSHQPSDGNSEMIEKLKKRKSAEEHDSNMGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGGVPPPDAGGAGGASFFSTGEGPTSFPFNPRNADDIFAEFFGFSSPFGGAGGYGGMRSSRFSSGIFGDDMFGSYGEGRGVHMHPGAPRKAPPIENRLPCSLEDLYQGTTKKMKISREIADASGKTMPVEEILTINIKPGWKKGTKITFPEKGNERPNVTPADLVFIIDEKPHSVFTRDGNDLVVTQKISLAEALTGYTVQLTTLDGRNLTIPINNVIHPSYEEVVPREGMPLQKDPTKKGNLRIKFNIKFPARLTSEQKAGIRKLLGA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0820 446 Gene3D - 350 429 - -
Lele30g0820 446 SUPERFAMILY Chaperone J-domain 106 176 IPR036869 -
Lele30g0820 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 352 438 IPR008971 GO:0006457|GO:0051082
Lele30g0820 446 CDD DnaJ 107 162 IPR001623 -
Lele30g0820 446 Pfam DnaJ domain 107 170 IPR001623 -
Lele30g0820 446 Gene3D DnaJ domain 105 229 IPR036869 -
Lele30g0820 446 FunFam Dnaj homolog subfamily b member 267 348 - -
Lele30g0820 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 265 356 IPR008971 GO:0006457|GO:0051082
Lele30g0820 446 FunFam DnaJ subfamily B member 13 350 430 - -
Lele30g0820 446 ProSiteProfiles dnaJ domain profile. 107 173 IPR001623 -
Lele30g0820 446 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 104 444 - -
Lele30g0820 446 PRINTS DnaJ domain signature 145 165 IPR001623 -
Lele30g0820 446 PRINTS DnaJ domain signature 127 142 IPR001623 -
Lele30g0820 446 PRINTS DnaJ domain signature 109 127 IPR001623 -
Lele30g0820 446 PRINTS DnaJ domain signature 165 184 IPR001623 -
Lele30g0820 446 SMART dnaj_3 106 165 IPR001623 -
Lele30g0820 446 CDD DnaJ_C 269 432 - -
Lele30g0820 446 Pfam DnaJ C terminal domain 271 429 IPR002939 -
Lele30g0820 446 Gene3D - 270 348 - -
Lele30g0820 446 ProSitePatterns Nt-dnaJ domain signature. 150 169 IPR018253 -
Lele30g0820 446 FunFam DnaJ subfamily B member 13 106 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0820 Lele-ChrLele30 12365469 12369498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0820 108 172 C2H2 Transcription Factor Family AT1G74250 39.130 2.86e-09 57.4