Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0819 ATGGAGGCTTGTTCAGAAGGAGAGAAGAAAAAGCCACCTGAGGGGGAGAATAAGACCAAGCGCAAAATGAAGACTGCTTCCCAGTTGGAGATTCTGGAGAAAACTTATGCTACTGAACCGTATCCATCCGAGGCATTGCGAGCAGAGCTATCGGCGAAATTGTGTCTTTCAGATCGTCAACTGCAGATGTGGTTTTGTCACCGCAGGTTGAAAGACAGAAAGATACCAGCGGCGAAGAAGCCGGGGAATGAATCGCCATCTGGAGCGGTCACTCCGGCGCCAGTGGCTGACGGTTTTGAGCAGAAGGTAATGAGTGATGGTGGACATGCGCGTGATTCCATTTATGGGAAGAGGCCATACAGTCATATGGATCCACGGCGAGCTGTCCCACGACCTGGTATGGCCTTTACTAATATTGGAGGGGGATTGCCAGCAATGGAGAGTTACTATGAATCACATCGGTCCAAAGCTGAGCTGAAAGCTATTGCATTTGTGGAAGCACAGTTAGGGGAGCCATTAAGAGAGGGCGGGCCCATTTTGGGGATGGAATTTGATCCGTTGCCACCCGGTGCGTTTGGTGCACCAATAGGGCCAACTGCAATGGGGCAGCATCGGCAATCTGGAAGGCCTTTTGAGGCAAAAATTTATGAACGATTGGACAAGGGGACTTCAAGGACTCTCCATGAATATAAATTTATTCCAGAGCAGCCAACTGTTAGAAATGAGACACATGACTATGAGAGAGTCACCCCTTCTAACCACTATGGTTCTTTTGATGGAATTCCACATGCAAGGACTTCATTATCTAGTGGGCGACCATTCCTTGATGGGAATGAAATTGCTTCCTATGGATATGGATATCAGAATCTGATGCCCGGGTTAAATCTTTTGTCTCAGCAAGGCAGGCTGAATCATCTTTTACCTTCTTCTTCTAGACAGAATGATAATGCTCCATGGAAAAACACGTGGCCTGCTGACTCTCATATCGGACCTTACCCTGCAGCTCAAATTGACAGCATAGTAACTCCATCTGACCAGAATGTTATCCATGAGGAGCAAATTTCACGGTTTCAGAGGAAGAGGAAGAATGAAGAGACTAAAATGCAGCGGGAACTTGAGGCACAAGAGAAACGGATCAGAAAAGAGCTTGAAAAGCAGGATATTTTAAGGCGAAAGAGAGAGGAGCAAGTAAGGAAAGAGATGGAGAGGCACGAACGTGAAAGGCGGAAGGAAGATGAAAGGATATTGCGTGAAAGACAGCGGGAAGAGGAGAGATACCAAAGAGCACAAGGGCGTGAACTAGAGCGGAGGGAGAAGATTTTGCAGAAAGAGTCAATCAGAGCTGAGAAAAGGAAACAGAAGGAAGAATTACGCAAAGAGAAAGAGGCAGCAAGGATCAAAGCAGCCAATGAGAGAGCTATTGCTCGCAGAATGGTCAAAGAATCAATGGAACTTATTGAAGATGAACGGCTGGAATTGATGGAGTTAGCTGCATCTGAAAAGAGACTTTCTTCAATTTTGTCCCTTGACTATGAAACTTTACAGAATCTTGAATTATTTAAAGATCGGAAGACTTCATTTCCACCTAAAACTGTGGTGCTGAAAAGACCTTTCTCAATTCAACCTTGGTTGGATTCTGAGGAGAACATAGGAAACCTTTTGATGGTTTGGAGGTTTTTGATCTCCTTTTCTGATGTTCTTGGGATTTGGCCATTCACTTTGGATGAATTTTTACAAGCTTTTCATGATCATGATTCTAGGTTGTTAGGCGAGATTCATATTGCTCTTTTGAGATCTATTATAAAAGATATTGAAGATGTTGCAAGAACTACAGGGGCAGGAGCTAATCATAACAGTGCTGTCAATCCTTGTGGAGGTCATCCGCAAGTAGTTGAAGGGGCATATGTGTGGGGGTTTGATATAAGAAATTGGCAGCGACTCTTAAATCCCTTAACATGGCCAGAAATTATGCGGCAATTTGCTTTATCAGCCGGATTTGGGCCACAATTGAAGAAAAGAATCATTGAGCCTCTGTATCATTGTGATAAGAATCAGGGTATTGATGGTGAAGATGTTATTTCCAATTTACGTAGTGGGGCGGCTGTTGAAAATGCTGTTGCTATCATGCAAGAAAAGGGTTTATCTAACCCAAGGAGATCTAGGCATCGCTTGACACCTGGAACTGTTAAATTTGCAGCATTTCATGTCTTATCTCTTGAAGGAAGTAAGGGCCTTACCATATTGGAAACTGCAGACAAGATTCAGAAATCTGGACTTCGTGATCTTACGACAAGCAAAACTCCAGAGGCTTCTATAGCTGCCGCTTTGTCCAGGGACACAAAGCTTTTTGAAAGGACAGCTCCTTCGACATATTGTGTGCATCCTGCATATAGGAAGGACCCAGCTGATGGCAAGGAAATCCTCTCAGCTGCCAGGGAAAGAATCAGGATATTCAAAAATGGACTTGTCAATGCAGAAGAACCAGATGATGGTGAAAGGGATGATGACTCAGAAATTGATATGGCAGAAGATCCTGAGGCTGATGATTTATTTACTGGAACAAATAACAAGGAGGCTTCTGATTTTGTGGAATCTAGTTTGAACACTGTAGTTAAGAATAGAGAAGGCAGTTGTGAAATTTTGCAAACTCCTGATGGTGGCAATGGACAAGTGGATGAGGGTTTAGCATCAATTGTTGCTGAAGAATTTAATCAGGAAATTGGCAGTAGTAGCAATGTTGTAACTAAACCTGATCTGGCAGAAACCAGTATTGATGAAAGTAATACTGGTGAACCATGGGTTGAAGGGCTTGTTTTAGGAGAATACTCAAATGTTAGTGTGGAAGAGCGACTTAATGCCCTTGTTGCTCTGATTGGTGTGGCAATTGAAGGAAATTCAATCCGTTTTGTTCTTGAGGAGCGTCTGGAAGCAGCAAATGCTTTAAAGAAGCAGATATGGACAGAGGTGCAGCTTGATAGACACCGAATCAAAGAGGATTGCTTTTTTAAGGTGCAGTCTGCCCCTTGTGTGGGCAATAAGAATGAACCAGCTCCTTCAATATCATCCATGGGGGGTAAACAGAGCCCTCTGATTAGTGTTGATAACAGGAATGACAAAACACTGCCAACCCCCCCCACCCAGCAAGCACAGTTAAATGACCTACTGGGCAATCAGACCCATCTTCAGAGTGTTCCATCGGAAGTGAATATAAAAATGCAAGACTCTGCTGTCCCTGATAATTATTCTTGCCAACAATTTGGATCCGGTGCTGAAAAGTCAAAATCAAATTTCAAAGCATACATTGGTCAATTGGCAGAAGAAACTTATATTCATAGGTCATTGCCTCTTGGTTTGGATCGGAGACGTAATCGATACTGGCAGTTCATTACATGTTCTTCTCAAAATGATCCAGGCTGTGGTAGGGTTTTTGTGGAGATGCATGATGGCTGTTGGAGGCTGATTGATTCTGAAGAGGGTTTTGATGCTCTCTTGGCATCATTGGATGTACGTGGGATTAGGGAATCCCATTTGCACATGATGTTGCAACGAATTGAAATGTCCTTCAAGGAATGTGTTAGAAGGAATAAGTTGAGAAGGCAAGATGGAGACACTGTTAGTACAGAAGCTTTTCAGATGGCTACTGAGCATGGTTGCTGTGCTTCAATGTCAGAGTCATCAACATCTTTTCTGGTTCAGCTGGGAAGGAATGATTCTGATAACCAAGGTGCATTGAGGAGATACCAGGAACTTGAAAAATGGATGCTGAAGGAAGTCCTGGATTCCTCAGTATTATGTGCGTTGAGGGCTGGGAAGGGAAGGTGCAGTCAATTGTTGGCCATGTGTGATTACTGCCATGAGATCTATTTATCTGAAGAAATTCCATCTCATTCCTGCTGTAGAACCCTTCGTACTTGTAAGAGCAACTTAAGCTCTTCTGAACATATGGCTCAATGTTCAGGAGAAGTGAAGATTACCAGTGATTATGCATTTAGTGTCTCCCCCTCTTCTCCATTAAGAATGAAATTACTAAAAGTGCTGTTGTCAATAGTTGAGGTTTCCATTCCTGAAGAAGCTCTTGAACCAATTTGGACAGACAGCTATCAGAAGTCTTGGATTATAAAGCTGCATGCCTCTTCTTCCTCTGAAGAACTTCTTGAGATTTTGACCATACTGGAGGGTGCTATCAAGAGGGATTATTTGGCTTCAAACTTCAACACTACCAGGGAGCTGTTGGGTTCTATTTTTCGTTCTGGATTTCATATTGATTCCATGGAAGCTGAAAGAATTCCTGTACTGCCGTGGGTGCCTCATACAACAGCTGCTGTGGCGCTAAGGCTCATGGAACTTGACATCTCAATCTTTTATACCTTGGAGCAGAAGCTGGAGTCTGAAAAGGACAAGACAAATGAGAATGTTATGAAGTTTCCTTCAAAACATGCTTCTGCCAAAATCGCCCAAGTTGGTACAGCTGAGTCTTCACATTTAGCTGGGCATAACATAGTTGATCTGGGTGCTGGATTTGCTAGCTACAGTCGAGGACAAAGGTCCCATGGACAGGGCATAGGTCGCTCTCATGGTGGGGGATCACAGGGAAGGATCATCAATTCAAGATCTGAATCTAGAAAGAAAGTTACTGCCACTAGCAGCAGGAGACCTGGACAGGGACTAAGATGGAAAGGGAAATCACGAGGTCGTGGAGGGCAGCGTCGCACTCCTCGTAGCAAAAAGAAACCATCAGCTAAAGAGCGTGAGATTACTGTTGAGAGGGATGTTCCCAAAGAGGAATCAGCCGGTACTTTTGTCAGGGCGGCAAGTAATGTAGCTGAAACCATTGGTTGTCAAATGGAGATTCCTGAAAATGCTGCTAGCAGTTCTGGGAGATCAGATTATGAGGAAGACAAATATCAAGTGACAGGTGACGAGAATGATTATCTAGTGGATAATAATGATAATGGCTATGATAGATGTGGATTTAATGGGAAGTCTGAGAATATAGTAGAAGATAGTTTAGTTAATTTAGATGATGAGGAAGATGGGGGTGGATTTAGTGGGAAGTCTGACAATTTAACAGAAGGGATTGATTTTAATATAGATGATGAGGAAGAGGAAGATGTTGATGAGATTGAGGACGAAGAGGATGAGCCAGTCGGTGTCAATGTCGATGTTGAAGGCTTCATAAATGGGGATTCAGATATGGGAGAGAACTCTTCATCCTCAGAGTACAGCGGCTAA 5232 0.4343 MEACSEGEKKKPPEGENKTKRKMKTASQLEILEKTYATEPYPSEALRAELSAKLCLSDRQLQMWFCHRRLKDRKIPAAKKPGNESPSGAVTPAPVADGFEQKVMSDGGHARDSIYGKRPYSHMDPRRAVPRPGMAFTNIGGGLPAMESYYESHRSKAELKAIAFVEAQLGEPLREGGPILGMEFDPLPPGAFGAPIGPTAMGQHRQSGRPFEAKIYERLDKGTSRTLHEYKFIPEQPTVRNETHDYERVTPSNHYGSFDGIPHARTSLSSGRPFLDGNEIASYGYGYQNLMPGLNLLSQQGRLNHLLPSSSRQNDNAPWKNTWPADSHIGPYPAAQIDSIVTPSDQNVIHEEQISRFQRKRKNEETKMQRELEAQEKRIRKELEKQDILRRKREEQVRKEMERHERERRKEDERILRERQREEERYQRAQGRELERREKILQKESIRAEKRKQKEELRKEKEAARIKAANERAIARRMVKESMELIEDERLELMELAASEKRLSSILSLDYETLQNLELFKDRKTSFPPKTVVLKRPFSIQPWLDSEENIGNLLMVWRFLISFSDVLGIWPFTLDEFLQAFHDHDSRLLGEIHIALLRSIIKDIEDVARTTGAGANHNSAVNPCGGHPQVVEGAYVWGFDIRNWQRLLNPLTWPEIMRQFALSAGFGPQLKKRIIEPLYHCDKNQGIDGEDVISNLRSGAAVENAVAIMQEKGLSNPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILETADKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCVHPAYRKDPADGKEILSAARERIRIFKNGLVNAEEPDDGERDDDSEIDMAEDPEADDLFTGTNNKEASDFVESSLNTVVKNREGSCEILQTPDGGNGQVDEGLASIVAEEFNQEIGSSSNVVTKPDLAETSIDESNTGEPWVEGLVLGEYSNVSVEERLNALVALIGVAIEGNSIRFVLEERLEAANALKKQIWTEVQLDRHRIKEDCFFKVQSAPCVGNKNEPAPSISSMGGKQSPLISVDNRNDKTLPTPPTQQAQLNDLLGNQTHLQSVPSEVNIKMQDSAVPDNYSCQQFGSGAEKSKSNFKAYIGQLAEETYIHRSLPLGLDRRRNRYWQFITCSSQNDPGCGRVFVEMHDGCWRLIDSEEGFDALLASLDVRGIRESHLHMMLQRIEMSFKECVRRNKLRRQDGDTVSTEAFQMATEHGCCASMSESSTSFLVQLGRNDSDNQGALRRYQELEKWMLKEVLDSSVLCALRAGKGRCSQLLAMCDYCHEIYLSEEIPSHSCCRTLRTCKSNLSSSEHMAQCSGEVKITSDYAFSVSPSSPLRMKLLKVLLSIVEVSIPEEALEPIWTDSYQKSWIIKLHASSSSEELLEILTILEGAIKRDYLASNFNTTRELLGSIFRSGFHIDSMEAERIPVLPWVPHTTAAVALRLMELDISIFYTLEQKLESEKDKTNENVMKFPSKHASAKIAQVGTAESSHLAGHNIVDLGAGFASYSRGQRSHGQGIGRSHGGGSQGRIINSRSESRKKVTATSSRRPGQGLRWKGKSRGRGGQRRTPRSKKKPSAKEREITVERDVPKEESAGTFVRAASNVAETIGCQMEIPENAASSSGRSDYEEDKYQVTGDENDYLVDNNDNGYDRCGFNGKSENIVEDSLVNLDDEEDGGGFSGKSDNLTEGIDFNIDDEEEEDVDEIEDEEDEPVGVNVDVEGFINGDSDMGENSSSSEYSG 1743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0819 1743 MobiDBLite consensus disorder prediction 1511 1593 - -
Lele30g0819 1743 MobiDBLite consensus disorder prediction 105 129 - -
Lele30g0819 1743 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 5 1742 IPR044977 GO:0006357
Lele30g0819 1743 Pfam HB1, ASXL, restriction endonuclease HTH domain 727 793 IPR007759 GO:0006355
Lele30g0819 1743 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 929 968 IPR028942 -
Lele30g0819 1743 SUPERFAMILY Homeodomain-like 13 75 IPR009057 -
Lele30g0819 1743 Coils Coil 347 392 - -
Lele30g0819 1743 Gene3D - 2 76 - -
Lele30g0819 1743 MobiDBLite consensus disorder prediction 1693 1718 - -
Lele30g0819 1743 SMART HOX_1 17 79 IPR001356 GO:0003677
Lele30g0819 1743 ProSiteProfiles DDT domain profile. 547 606 IPR018501 -
Lele30g0819 1743 ProSiteProfiles HARE-type HTH domain profile. 727 796 IPR007759 GO:0006355
Lele30g0819 1743 Coils Coil 394 421 - -
Lele30g0819 1743 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1112 1184 IPR028941 -
Lele30g0819 1743 Pfam Homeodomain 18 74 IPR001356 GO:0003677
Lele30g0819 1743 Coils Coil 440 474 - -
Lele30g0819 1743 Pfam DDT domain 548 603 IPR018501 -
Lele30g0819 1743 MobiDBLite consensus disorder prediction 1556 1576 - -
Lele30g0819 1743 MobiDBLite consensus disorder prediction 105 125 - -
Lele30g0819 1743 SMART testlast3 547 606 IPR018501 -
Lele30g0819 1743 MobiDBLite consensus disorder prediction 1577 1593 - -
Lele30g0819 1743 CDD homeodomain 18 74 IPR001356 GO:0003677
Lele30g0819 1743 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
Lele30g0819 1743 MobiDBLite consensus disorder prediction 1673 1743 - -
Lele30g0819 1743 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0819 Lele-ChrLele30 12354904 12364127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0819 14 1476 Homeobox Transcription Factor Family AT1G28420 47.832 0.0 1126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele30g0819 WSD 8.3e-13 No_clan