Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0817 ATGAGTATAGTTGACAGAACTTGTCCATCGTGTGGCCATCATGTCAAAGACCAGGGAGGAATACAAGAGTTACCAGGATTACCAGCAGGAGTGAAGTTTGATCCGAGTGATCAGGAGCTGTTAGAACACTTGGAAGCGAAGGTGAGGTCTGATATTCAAAAGCTTCATCCTTTGATCGATGACTTCATTCCTACTCTTGAAGCCCAAAATGGAATCTGCTCTACTCATCCCCAGAAACTCCCAGGAGTTAGAAAAGATGGCCTAATCCGGCATTTCTTTCACAGGCCATCAAAAGCATACACAACGGGAACAAGGAAAAGGAGAAAGGTAAACTCAGAAGAAGCAGAAGGAAGTGAGACAAGGTGGCACAAAACAGGCAAGACAAGACCAGTTTACATAAATGGGAAGTTGAAAGGCTACAAGAAAATCCTCGTACTTTACGCCAACTATGGAAAACAGAGGAAGCCTGAGAAGACCAACTGGGTGATGCATCAGTACCACCTCGGATCCAACGAAGAGGAGAAGGAAGGCGAGTTGGTGGTGTCCAAGGTTTTCTATCAGACACAGCCTCGTCAGTGTGGTAATTCCATCCTCAAAACCCATCAACCTCTGCATCATCATCATCTTCAAGGAGCTGTCACGAACATCAAGAACAATAATGGCTTCGTTGAGTTCTATAACTCTGCTTTCATATCATTTGATCAAGCTGCCCAACAAAGAACTTCTCATTTCCCAATTCATGATGATGAATCTCCTTTCATTGCTTGA 768 0.4401 MSIVDRTCPSCGHHVKDQGGIQELPGLPAGVKFDPSDQELLEHLEAKVRSDIQKLHPLIDDFIPTLEAQNGICSTHPQKLPGVRKDGLIRHFFHRPSKAYTTGTRKRRKVNSEEAEGSETRWHKTGKTRPVYINGKLKGYKKILVLYANYGKQRKPEKTNWVMHQYHLGSNEEEKEGELVVSKVFYQTQPRQCGNSILKTHQPLHHHHLQGAVTNIKNNNGFVEFYNSAFISFDQAAQQRTSHFPIHDDESPFIA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0817 255 MobiDBLite consensus disorder prediction 106 122 - -
Lele30g0817 255 Pfam No apical meristem (NAM) protein 28 168 IPR003441 GO:0003677|GO:0006355
Lele30g0817 255 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 211 IPR044799 GO:0003700
Lele30g0817 255 MobiDBLite consensus disorder prediction 100 122 - -
Lele30g0817 255 FunFam NAC domain-containing protein 73 36 191 - -
Lele30g0817 255 Gene3D NAC domain 36 191 IPR036093 GO:0003677|GO:0006355
Lele30g0817 255 ProSiteProfiles NAC domain profile. 27 187 IPR003441 GO:0003677|GO:0006355
Lele30g0817 255 SUPERFAMILY NAC domain 15 187 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0817 Lele-ChrLele30 12337288 12339135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0817 6 197 NAC Transcription Factor Family AT4G28500 76.804 9.83e-113 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele30g0817 NAM 1.8e-22 No_clan