Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0809 ATGGAATCCCAAAACGAAGGGCATTATTCAGCAACAAGACTCCTTCGTGCTCAAACCCACATATGGAACCACATCTTCAGTTTCATTAACTCAATGTCCCTCAAATCTGCTATAGATTTAAACATTCCAGACATCATTCACAAGCATGGCAAACCTATGCCTCTGTCCCTTCTCATTTCTTCCCTACGAATTATCCATCCTTCTAAAACTAGCAATATCTATCGCTTAATGCGAATCCTCACTCATTCTGGCTTCTTCTCTCTCCAGAAGCTTCCTGGTGAAGAAGCAGAAGAAGGCTATGACCTTACCGATGCATCAGCCCTTCTTTTGAAGGACGATCCCTTAAGTGTCACCCCTTACTTGCTTTCCATGTTGGATCCCGTCCTAAACAAGCCTTGGTACGAGGTGGCTAACTGGTTCCAGAACGACGATCCGGCGCCGTTTGACACAGCACATGGAAAGACGTTTTGGGACTATGCCGGGGTTGAGCCTAAGTTTAACCATTTCTTCAATGATGGTATGGCTAGTGATGCCAGATTGGTGGCCAGTGTGGTGATTGACAAGTGTAAGGGTGTGTTTAAGGGATTAGAGTCATTAGTTGATGTCGGTGGTGGGACAGGGACATTGGCTAAAGCTATTGCCAAAGCGTTTCCAGATATTCAATGTACTGTGTTCGATCTCCCACACGTTGTTGATGGTCTGCAAGATAGTGGGAATCTCAAGTTTGTCGGAGGAGACATGTTCGAGGCCATTCCTCCTTCTGATGGCATACTATTGAAGTGGATTCTACATGATTGGAATGATGAGGAATGTGTGAAGATATTGAAGAAGTGCAAGGAGTCAATCACAAACGAAGGGAAAGATGATGGGAAGGTGATTATAATAGACATGATCATGGGGAATGCTAAGGGAGATATCGATGATGAATCAGTAGAAACACAGTTGTTCTTTGATATGTTGATGATGGTTCTGTGCAATGGAAAAGAGAGGAATGAGAACGAATGGGCCAAGTTGATCTCCTCTGCTGGTTTTAGTGATTATAAGATTACTCCAGTTCTAGGTGTGAGATCTCTCATTGAGCCCCTTGATGAGTGTGACGCATTGCATGATCATGAACTCAATCAAATGTTGAATCATGCTATGGCTAGCGATGCTCAAATAGTGACTAGTGTGGGGATGGAGAAATGTATGGGAATGTTTGAAGGTTTAGAGTCACTTGTTGATGTTGGGGGCGGCACAGGGACCTTGGCCTCCACCATTGCCAAAACATTCCCACAATTGGATTGCACTGTGTTTGATCTCCCTCATGTTGTTGCTAGCTTGCAAGGTCGTGAGGATGAGAACTTAAGATATGTTGCAGGTGACATGTTTCGAGGAAATTCCTCAGGCCAATGCCATTTTGTTGAAGGTAAAAAATGTTCAGTATTAACACAGGCACACAGCTTCCATTATGTTCTATTTATTGTCATTTGA 1473 0.4358 MESQNEGHYSATRLLRAQTHIWNHIFSFINSMSLKSAIDLNIPDIIHKHGKPMPLSLLISSLRIIHPSKTSNIYRLMRILTHSGFFSLQKLPGEEAEEGYDLTDASALLLKDDPLSVTPYLLSMLDPVLNKPWYEVANWFQNDDPAPFDTAHGKTFWDYAGVEPKFNHFFNDGMASDARLVASVVIDKCKGVFKGLESLVDVGGGTGTLAKAIAKAFPDIQCTVFDLPHVVDGLQDSGNLKFVGGDMFEAIPPSDGILLKWILHDWNDEECVKILKKCKESITNEGKDDGKVIIIDMIMGNAKGDIDDESVETQLFFDMLMMVLCNGKERNENEWAKLISSAGFSDYKITPVLGVRSLIEPLDECDALHDHELNQMLNHAMASDAQIVTSVGMEKCMGMFEGLESLVDVGGGTGTLASTIAKTFPQLDCTVFDLPHVVASLQGREDENLRYVAGDMFRGNSSGQCHFVEGKKCSVLTQAHSFHYVLFIVI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0809 490 PANTHER O-METHYLTRANSFERASE 369 459 IPR016461 GO:0008168
Lele30g0809 490 CDD AdoMet_MTases 199 299 - -
Lele30g0809 490 Gene3D - 3 109 IPR036388 -
Lele30g0809 490 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 360 IPR029063 -
Lele30g0809 490 Pfam O-methyltransferase domain 133 345 IPR001077 GO:0008171
Lele30g0809 490 Pfam O-methyltransferase domain 369 458 IPR001077 GO:0008171
Lele30g0809 490 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 370 490 IPR016461 GO:0008168
Lele30g0809 490 Gene3D Vaccinia Virus protein VP39 366 470 IPR029063 -
Lele30g0809 490 Gene3D Vaccinia Virus protein VP39 110 361 IPR029063 -
Lele30g0809 490 SUPERFAMILY "Winged helix" DNA-binding domain 13 114 IPR036390 -
Lele30g0809 490 FunFam O-methyltransferase ZRP4 111 362 - -
Lele30g0809 490 Pfam Dimerisation domain 32 81 IPR012967 GO:0046983
Lele30g0809 490 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 363 IPR016461 GO:0008168
Lele30g0809 490 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
Lele30g0809 490 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 368 458 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0809 Lele-ChrLele30 12295950 12299448 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0809 370 469 Monolignol Biosynthesis Gene Families AT5G54160 36.000 1.20e-10 61.2