Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0808 ATGATTATTAAGGATTTGAATTCGAATTTGAATTCTCCCGATTTCTCTTTCCCTATATTTATTCTTCACTTGTCATCACAACTAATGATTGAGATGGAGAGCATAGAGGAAGTAGAGGGAAAAGGAAATATAGAAAACCATCCAAGTCCCAGCGAAAATCCATCCCAAAACGACAATCACATATCATCATCATCTTCTTCCATGGGATCCCAAAACAAAGAGCTTGGAGCAACAAGACTCCTTCATGCTCAAACCCACATATGGAATCACATCTTCAGCTACATAAACTCAATGACTCTCAAGTCTGCAATTGAGTTGAACATACCAGAAATCATCCACAAGCATGGCAAGCCAATGCCCCTTCCTCTTCTCATCTCTTCCATTCAAATTCACCCTTCTAAATCTCCTTACATTCATCGACTAATGCGACTCCTCACCTATTCTGGCTTCTTCTCTCTCCAGAAGCTTCCAGAAGAAGGCTATGTCCTAACAGATGCATCAACCCTTCTTCTCAAGGACCACCCCTTAACTGCGACACCTATGGTCCTCCTTCTGGTCGATCCCGCCATGAAAAAGCCTTGGTATGAGCTGACCAATTGGCTTCAAAATGATGATCCGTCGCCTTTTCACACGGCTCATGGGATGAAGATTTGGGACTACGCTGACGTGAACCCTAAGTTTAATCATGTTTTCAATGAAGCTACTGCTAGTGATTCGAGCTTGGTCATGAGAGTGGCGCTTGAAAGTTGCAAAGAGGTGTTCAAAGGAATAAAGTCGTTGGTGGACGTTGCGGGTGGCACTGGGACTACAGCTAAGGCCATTGCTAAAGAATTCCCAGAAATTGAATGTACTGTGTTTGATCTCCCACATGTTGTTGATGGCCTGAAAGATAGTAGAAATCTCAAGTTTGTGGGAGGCAACATGTTCGAGGCTGTTCCTCCTTCCGATGCCATACTGATGAAGTGGATAGTACATGATTGGGAAGATGAGCAGATTCTGAAGATTCTGAAGAATTGCAGGGAGGGAATTGCAGCAAGCAAAGGGGAAGGAGGGAAGAAGTTGATAATAATAGACAGCGTGTTGGAGGATGACGTGGCCGGAGACAAGCAAAACGGAACAGTAGAGAATCAACTGTTGATGGATATGGAGGTAATGGCTTTGTATCCTGGAAAAGAGAGGACTGAGAAAGAACTGGCCAACTTATTCCGTTCTGCCGGTTTTACTGATTACAAGATTTATCCTGTTCTGGGTTCGCGCTCTCTCATCGAGGTTTATCCATGA 1281 0.4379 MIIKDLNSNLNSPDFSFPIFILHLSSQLMIEMESIEEVEGKGNIENHPSPSENPSQNDNHISSSSSSMGSQNKELGATRLLHAQTHIWNHIFSYINSMTLKSAIELNIPEIIHKHGKPMPLPLLISSIQIHPSKSPYIHRLMRLLTYSGFFSLQKLPEEGYVLTDASTLLLKDHPLTATPMVLLLVDPAMKKPWYELTNWLQNDDPSPFHTAHGMKIWDYADVNPKFNHVFNEATASDSSLVMRVALESCKEVFKGIKSLVDVAGGTGTTAKAIAKEFPEIECTVFDLPHVVDGLKDSRNLKFVGGNMFEAVPPSDAILMKWIVHDWEDEQILKILKNCREGIAASKGEGGKKLIIIDSVLEDDVAGDKQNGTVENQLLMDMEVMALYPGKERTEKELANLFRSAGFTDYKIYPVLGSRSLIEVYP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0808 426 PANTHER O-METHYLTRANSFERASE 81 411 IPR016461 GO:0008168
Lele30g0808 426 Gene3D Vaccinia Virus protein VP39 171 426 IPR029063 -
Lele30g0808 426 MobiDBLite consensus disorder prediction 46 71 - -
Lele30g0808 426 Pfam O-methyltransferase domain 194 407 IPR001077 GO:0008171
Lele30g0808 426 FunFam O-methyltransferase ZRP4 172 426 - -
Lele30g0808 426 Pfam Dimerisation domain 98 146 IPR012967 GO:0046983
Lele30g0808 426 FunFam Coniferyl alcohol 9-O-methyltransferase 70 170 - -
Lele30g0808 426 SUPERFAMILY "Winged helix" DNA-binding domain 80 175 IPR036390 -
Lele30g0808 426 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 177 425 IPR029063 -
Lele30g0808 426 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 88 426 IPR016461 GO:0008168
Lele30g0808 426 Gene3D - 68 170 IPR036388 -
Lele30g0808 426 MobiDBLite consensus disorder prediction 41 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0808 Lele-ChrLele30 12281903 12286102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0808 98 424 Monolignol Biosynthesis Gene Families AT5G54160 35.398 4.19e-54 182