Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0806 ATGGGATCCCAAAACAAAGAGCTTGGAGCAACAAGACTCCTTCATGCTCAAACCCACATATGGAATCACATCTTCAGCTACATAAACTCAATGACTCTCAAGTCTGCAATTGAGTTGAACATACTAGAAATCATCCACAAGCATGGCAAGCCAATGCCCCTTCCTCTTCTCATCTCTTCCATTCAAATTCACCCTTCTAAATCTCCTTACATTCATCGACTAATGCGACTCCTCACCTATTCTGGCTTCTTCTCTCTCCAGAAGCTTCCAGAAGAAGGCTATGTCCTAACAGATGCATCAACCCTTCTTCTCAAGGACCACCCCTTAACTGCGACACCTATGGTCCTCCTTCTGGTCGATCCCGCCATGAAAAAGCCTTGGTATGAGCTGACCAATTGGCTTCAAAATGATGATCCGTCGCCTTTTCACACGGCTCATGGGATGAAGATATGGGACTACGCTGACGTGTTCAAAGGAATAAATTCGTTGGTGGACGTTGCGGGTGGCACTGGGACTACAGCTAAGGCCATTGCTAAAGCATTCCCAGAAATTGAATGTACTGTGTTTGATCTCCCACATGTTTTTGATGGCCTGAAAGATAGTAGAAATATCAAGTTTGTGGGAGGAAACATGTTCGAGGCTGTTCCTCCTTCCGATGTCATACTGATGAAGTGGATAGTACATGATTGGGAAGATGAGCAGATTCTGAAGATTCTGAAGAATTGCAGGGAGGGAATTGCAGCAAGCAAAGGGGAAGGAGGGAAGAAGTTGATAATAATAGACAGCGTGTTGGAGGATGACGTGGCCGGAGACAAGCAAAACGGAACAGTAGAGAATCAACTGTTGATGGATATGGAGACAATGGTTTTGTATCCTGGAAAGGAGAGGACTGAGAAAGAACTGGCCAACTTATTCCGTTCTGCCGGTTTTACTGATTACAAGATTTATCCTGTTCTGGGTTCGCGCTCTCTCATCGAGGTTTATCCAAGAAATAAAATAACGGTCTTGCTTGTAACTAGTATTGATTACGGGACCAGCCTTGAGGATTACAACCCAGCAAGCCCTTTAAGCGTCACCCCTTTCTTGCTTGCCATGTTGGATCCAACCTTAACAAAACCTTGGTATCAAGTAGCTAACTGGTTCCAAAACGGCGATCCGACGCTGTTTCACACTGCGCATGGAAAGACATTTTGGGAGTATGCTGGGGTTCATCCTAAGCTTAATCTTTTTTTAAACGATGCTATGGCTAGTGAAGCGAGGATGGTAACGAGTGTAGTGATTGATAAGTGTAAGGGTGTGTTTAAGGGATTAGAGTCATTTGTAGATGTCGGTGGTAGGACAGGGACAGTGGCTAGGGGCTAG 1362 0.4501 MGSQNKELGATRLLHAQTHIWNHIFSYINSMTLKSAIELNILEIIHKHGKPMPLPLLISSIQIHPSKSPYIHRLMRLLTYSGFFSLQKLPEEGYVLTDASTLLLKDHPLTATPMVLLLVDPAMKKPWYELTNWLQNDDPSPFHTAHGMKIWDYADVFKGINSLVDVAGGTGTTAKAIAKAFPEIECTVFDLPHVFDGLKDSRNIKFVGGNMFEAVPPSDVILMKWIVHDWEDEQILKILKNCREGIAASKGEGGKKLIIIDSVLEDDVAGDKQNGTVENQLLMDMETMVLYPGKERTEKELANLFRSAGFTDYKIYPVLGSRSLIEVYPRNKITVLLVTSIDYGTSLEDYNPASPLSVTPFLLAMLDPTLTKPWYQVANWFQNGDPTLFHTAHGKTFWEYAGVHPKLNLFLNDAMASEARMVTSVVIDKCKGVFKGLESFVDVGGRTGTVARG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0806 453 FunFam Coniferyl alcohol 9-O-methyltransferase 3 103 - -
Lele30g0806 453 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Lele30g0806 453 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 329 IPR016461 GO:0008168
Lele30g0806 453 Pfam O-methyltransferase domain 374 451 IPR001077 GO:0008171
Lele30g0806 453 Pfam O-methyltransferase domain 155 310 IPR001077 GO:0008171
Lele30g0806 453 Gene3D Vaccinia Virus protein VP39 104 329 IPR029063 -
Lele30g0806 453 Gene3D Vaccinia Virus protein VP39 353 453 IPR029063 -
Lele30g0806 453 Gene3D - 2 103 IPR036388 -
Lele30g0806 453 SUPERFAMILY "Winged helix" DNA-binding domain 13 108 IPR036390 -
Lele30g0806 453 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 328 IPR029063 -
Lele30g0806 453 PANTHER O-METHYLTRANSFERASE 355 451 IPR016461 GO:0008168
Lele30g0806 453 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 355 452 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0806 Lele-ChrLele30 12273799 12276590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0806 356 452 Monolignol Biosynthesis Gene Families AT5G54160 29.897 9.28e-09 55.1