Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0801 ATGGGATCCACAAACGAAGCTGCTGCCACAAGAAGAGTGCTTGATGCTCAAAGCCATGGATGGAACCATATCTTCAGCTTCATAAACTCAATGTCTCTGAAGTCTGCAATTGAGTTAAACATACCAGACATCATTCATAAGCATGGCAAGCCCATGCCTCTTCATCTTCTCGTCTCTTCCCTTCAAATCAACCCTTCCAAAGCCCCTAACCTCCGTCGCTTGATGCGCCACCTCACTCATACCGGCTTCTTCTCTCCCCAGAAACTTCCAGAAACTTCTGAGGAAGAAGAAGGCTATGTCCTAACTGATGCTTCAAGCATTTTTCTCAAGGATCATCCCTTCACTCTCACCCCTCTTTTACTTTCCATGCTTGACCCACTCATGCTGAAACCCTGGGACCATTTGTCCACTTGGTTTCGGAACGACGATCCGACGCCGTTTGAGACGGCGCACGGAAAGCCTTTCTATGACAGTGCCTGGCACGTGCCTAAGCTTTTCCATTACTTCAGAGACTACATGGCTGGTGATTCGCGGCTGGTTTCAAAGGTGCTGGTTGAACAGTGTAGCGAGGTGTTTAAGGGATGTGGCTCGCTGGTTGATGTCGGCGGTAACACTGGCACCATGGCCAAGGCCTTAGCTGAAGCTTTTCCAGAAATCGAGTGTACTGTGTTCGATTCTCCTTACGTTATTGGTGGCATGAAAGACTCTGGGAACCTCAAGTTCGTCCAAGGAGACATGTTTCAAGCTATTCCTCCTGCTGATGCTATATTAATGAAGTGGATTCTATGTGATTGGGACGACGAGAGATGTTTGAAATTACTAAAGAACTGCAAGGAGGCAGTGACAAGCCAAGGCAAACGAGGAAAGGTGATTATAATAAACAAGGTGGTTGAAGACGATGGGAAGGGAGATTATGAATCGGTTGAAACACAGTTGCTATTTGATCTGACGGCGATGGCAGCGCTCCCAGGAAAAGAGAGGAATGAGAAAGAGTGGTCCCAGTTGATTTCCTCTGCAGGTTTCAGTTCCTATAAGATAACTCCAGTTCTGGGTTTAAGGTCTCTCATTGAGAATTGTTTTGATAATAACCAGCCACGAGATCATGCTTTTGAATCACCTGACCAATTTGAATGCCCTGCTTCAAATTTGTACAACACGGTTAATAAATCTGATATAGTTTGA 1182 0.4594 MGSTNEAAATRRVLDAQSHGWNHIFSFINSMSLKSAIELNIPDIIHKHGKPMPLHLLVSSLQINPSKAPNLRRLMRHLTHTGFFSPQKLPETSEEEEGYVLTDASSIFLKDHPFTLTPLLLSMLDPLMLKPWDHLSTWFRNDDPTPFETAHGKPFYDSAWHVPKLFHYFRDYMAGDSRLVSKVLVEQCSEVFKGCGSLVDVGGNTGTMAKALAEAFPEIECTVFDSPYVIGGMKDSGNLKFVQGDMFQAIPPADAILMKWILCDWDDERCLKLLKNCKEAVTSQGKRGKVIIINKVVEDDGKGDYESVETQLLFDLTAMAALPGKERNEKEWSQLISSAGFSSYKITPVLGLRSLIENCFDNNQPRDHAFESPDQFECPASNLYNTVNKSDIV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0801 393 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Lele30g0801 393 Gene3D Vaccinia Virus protein VP39 109 359 IPR029063 -
Lele30g0801 393 Pfam O-methyltransferase domain 132 342 IPR001077 GO:0008171
Lele30g0801 393 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 357 IPR029063 -
Lele30g0801 393 PANTHER O-METHYLTRANSFERASE 30 345 IPR016461 GO:0008168
Lele30g0801 393 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 360 IPR016461 GO:0008168
Lele30g0801 393 FunFam Coniferyl alcohol 9-O-methyltransferase 3 108 - -
Lele30g0801 393 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Lele30g0801 393 Gene3D - 2 108 IPR036388 -
Lele30g0801 393 SUPERFAMILY "Winged helix" DNA-binding domain 11 113 IPR036390 -
Lele30g0801 393 FunFam O-methyltransferase ZRP4 110 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0801 Lele-ChrLele30 12253414 12254951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0801 1 347 Monolignol Biosynthesis Gene Families AT5G54160 31.831 7.41e-41 146