Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0778 ATGTCGCAGACTGGGAAGTCGATGCAGGGACTGGCGCTCGATTCTCTCACTACTCGATCCCGCAATTTGTTGGGTTCTGACGGAAACAAGCCTGATTTTAAAGAACTCGATCTGGGTTCTCCTGTTTCTCCACTGAAAAACCCTGCCACGGTTAATGCTGCCGGCGCCGTCGCTTCTAACAAGACCTCAAGCTGCAGCTCGAGCTCCTCTGCCGGATCGGTTTCAGGTAGCAGAAATACCGTCGCCAAGTTGCCCAGTAAAGCAGAGGGGAAGCTCAGCAACAACGCCGTCGAGCTCCTTGAGACCAACTCAAACGCCTCCGAGAGCCTTCAATCGGCTTCGGCATCCCGAAGCACAAAGCCGGGTCATAGGAGATCGGTTTCAGCTGGAGCCCCGTTAATATACTCCGGTGGAAGTTCTAGCAGCTCGGGGAATAACGGTCATTCAAATGGTGCAACTTCAGGGACTAATTTGCTCCCAACCGGCAATATTTTTCCGACAGGGAAGATCTCAAAAACTGGTTTGGCGCCTCGAACGCCCAATAGAACTGATGTTTTGGGTTCAGGGACGATAAACTACGGCCGAGGCAACATAATGCGCGGTGGCGGGAAATTGGGCAATGGAGTGCACGTCATGGTCGACGACAATGTCGCCAGAAATTCTCAGCTCGGAGGGGTTTCGGGCATCGTGAAGCGGGCAATGAATGGTTCTGATCCTGAGGAGGTGAAAAAATCTGGAAATGAACTATACAGAAGCGGTCACTTTGTGGAGGCATTGTCGTTGTACGATCGCGCAATCTCCATATCACCTAATAATCCTGCTTACTGGAGTAATCGGGCGGCAGCGTTGACGGCGCTGGGGAAGTTGGCTGTGGCGGCGAAGGAGTGCAAAGAGGCTGTGAAGTTGGACCCTGTTTTCACAATTTTCGGCTATAGCTTTGGAATTCAAACTGTTTTTCTTTGCTTATTCCTTTCATATCGTAGCATGAATTTCTTGTTCTGCGAAGCTCGAAAGATTGGGGATTGGAAGAGCACAGTTAGGGAATCAGACGCAGCCATTGCTGTTGGAGCAGATTTCTCTCCCCAGCTTGTTGCTTGTAAAGCTGAAGCCTATTTGAAACTTCATCTACTTGACGACGCTGAGTCTACCCTCTCAAACATTCCAAAGCTTGAGGGTTGCTCTCAAACCAAGTTCTTTGGTATGGTTGGTGAAGCATATGTTCCCTTTGTTCGAGCTCAGGTTGAGATGGCCTTAGGAAGGTTTGAGAATGCAGTAGCAGAAGTAGAGAAGGATAGTTTGATAGATTATAGCAACATGGAAGTTGCAAGGGTAGTAAACACAGTGAAAACAGTGGCGAGGGCTCGCTCTCAAGGCAACGATCTTTTTGGCCACGGAAGATTTTCTGAAGCTTGCTCTGCTTATGGAGAAGGCCTCAAATATGATAGTTCCAACTATGTCTTGTTCTGCAATAGAGCTGTTTGCTGGTCTAAACTTGGACTGTGGGAAAAGTCTGTTGAGGACTGCAACCATGCTCTGCGAATACAGCCAAACTGTACCAAGGCCCTTCTCCGTAGAGCTGTCTCAAATTCAAAGCTCGAAAGGTGGGGAGATGCTATAAGAGATTATGAAGCATTAAAGAGTGAACTTCCTAGAGACAGTGAAGTTGCTGAGTCTCTTCGTCAGGCTCAGCTTGCATTGAGGAAATCTCGTGGGGAAGATAATGGTTCAAAACATGTTGAGGTTGAAGAAGTCTCTACATTAGATAGATTCAAAGCCGCAATTGCTTCTTCTGGTATCTTAGTGGTTCATTTCAAGAAGGCATATGATGAACAATGTAAAGAAATATCACCTTTCATAAACACGCTCTGCATTCGATACCCATATGTTAAATTCATCAAGGTGGATGTGGAAGAGTGTGCAAGTGTAGCAAAAGCTGAGAGCATAAGAGCTGTGCCAAGCTTCAGAATATATGCAAATGGAGAGAAGGTGATGGAGATGATCAGGCCAAGCCATCAGTTGTTGGAGGACTCTGTGAGGAACTGTTGTGATCTCTAG 2055 0.474 MSQTGKSMQGLALDSLTTRSRNLLGSDGNKPDFKELDLGSPVSPLKNPATVNAAGAVASNKTSSCSSSSSAGSVSGSRNTVAKLPSKAEGKLSNNAVELLETNSNASESLQSASASRSTKPGHRRSVSAGAPLIYSGGSSSSSGNNGHSNGATSGTNLLPTGNIFPTGKISKTGLAPRTPNRTDVLGSGTINYGRGNIMRGGGKLGNGVHVMVDDNVARNSQLGGVSGIVKRAMNGSDPEEVKKSGNELYRSGHFVEALSLYDRAISISPNNPAYWSNRAAALTALGKLAVAAKECKEAVKLDPVFTIFGYSFGIQTVFLCLFLSYRSMNFLFCEARKIGDWKSTVRESDAAIAVGADFSPQLVACKAEAYLKLHLLDDAESTLSNIPKLEGCSQTKFFGMVGEAYVPFVRAQVEMALGRFENAVAEVEKDSLIDYSNMEVARVVNTVKTVARARSQGNDLFGHGRFSEACSAYGEGLKYDSSNYVLFCNRAVCWSKLGLWEKSVEDCNHALRIQPNCTKALLRRAVSNSKLERWGDAIRDYEALKSELPRDSEVAESLRQAQLALRKSRGEDNGSKHVEVEEVSTLDRFKAAIASSGILVVHFKKAYDEQCKEISPFINTLCIRYPYVKFIKVDVEECASVAKAESIRAVPSFRIYANGEKVMEMIRPSHQLLEDSVRNCCDL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0778 684 MobiDBLite consensus disorder prediction 53 82 - -
Lele30g0778 684 MobiDBLite consensus disorder prediction 169 188 - -
Lele30g0778 684 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 335 679 IPR044534 -
Lele30g0778 684 ProSiteProfiles TPR repeat profile. 239 272 IPR019734 GO:0005515
Lele30g0778 684 SUPERFAMILY TPR-like 238 432 IPR011990 GO:0005515
Lele30g0778 684 SUPERFAMILY Thioredoxin-like 490 671 IPR036249 -
Lele30g0778 684 FunFam TPR repeat-containing thioredoxin TTL4 577 682 - -
Lele30g0778 684 Gene3D Tetratricopeptide repeat domain 326 569 IPR011990 GO:0005515
Lele30g0778 684 MobiDBLite consensus disorder prediction 104 123 - -
Lele30g0778 684 Gene3D Tetratricopeptide repeat domain 238 312 IPR011990 GO:0005515
Lele30g0778 684 CDD TRX_family 590 675 - -
Lele30g0778 684 Pfam Thioredoxin 586 668 IPR013766 -
Lele30g0778 684 Pfam TPR repeat 246 287 - -
Lele30g0778 684 Gene3D Glutaredoxin 570 681 - -
Lele30g0778 684 MobiDBLite consensus disorder prediction 104 161 - -
Lele30g0778 684 MobiDBLite consensus disorder prediction 21 88 - -
Lele30g0778 684 MobiDBLite consensus disorder prediction 133 161 - -
Lele30g0778 684 SMART tpr_5 451 484 IPR019734 GO:0005515
Lele30g0778 684 SMART tpr_5 239 272 IPR019734 GO:0005515
Lele30g0778 684 SMART tpr_5 519 552 IPR019734 GO:0005515
Lele30g0778 684 SMART tpr_5 485 518 IPR019734 GO:0005515
Lele30g0778 684 SMART tpr_5 273 306 IPR019734 GO:0005515
Lele30g0778 684 Coils Coil 411 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0778 Lele-ChrLele30 12126400 12129332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0778 240 302 U-box Gene Family AT3G07370 34.921 5.14e-07 50.1