Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele30g0767 | ATGGAAGTGTGGTCACGTGGACTCCAGCTTCAAGACATGGATGAGAGACGAAATGATGCAGGGCTTGCAGATCAAGGGCCATCAAACACTGCATGGTGGCCATCAGACTTTGTTGAAAAATTTGGATCTGTTTCTCTGGGTTCTCAAGAAGAGACCTTAAATAACAAAGAATCACCTAGACATTTTGAGAAAGATGTTTTGTCTCCTCATAAAGCATCGCAAATTCTCTGGCATACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCTGATAAAAGGCTCAAGGAAATTTTTGATAATATTCCTACTATGGATGAGATTCATGCTTTGGGTGCAGAGGGTCTAAAGGCTGATGTCATTTTGGTGGACGCAGAGAAAGATAAAAAAGTATCTATGTTGAAGCAATATGTCGTGGCCCTAGTGAAAGGATTGAACTCAAATCCAGCTGCGATAATAAGAAAGATAACTGGACTAGTTTCTGATTTTTATAAACGATCAAATGTGGAAAGTCCAGCAAAAGCTGCACTAGAGGAAACCTCCCACATGTTTGAGAATCGAGGTGCCCAGATACTGGGACAAATAAAGAATGGTTCATGCCGTCCTCGAGCAATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTTGAAAGTAGGCTCATGGTGGGTTTGCCAAACGATGGGGTTGTTGAATATGTAGACTCATACAAGCATATGTCAGTGATTGTTGTATTAAATTCTGTGGAACTGCTGGTTGATCTCATGCGATGCCCTGGTCAATTATTACCTCGATCAAACAAGGCAATTTTCATGACACATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCACTAGAACCAAACAGCCCTTTGTATGGGGTTTCAGAGAAAGTGGATGCTGATAGAGCTGAAAAGGATGAGAACCTCCCATTCCAGAGGAGATTTGATGTATCAGGCCCTTCTTTGCGAAATTTGATGTTACGGTCAAATACCAGTCTGGATAGGAAATTGAGTTTTTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGGCCTAGTCGAAGAAGGGTCATTGCAGAACAGAGGACAGCTAGTTCCAGTCCAGAGCATCCATCTTTTAAAGCACGGGGACGGTCAATGCTTAGTGGTGATAGGAAAGCATTCAGAGACTTTGCCGATGATGAGGCTGCATCAAGGTCAGATGGTGCATCTTCATCAGAAGCTCGTAGGATTAGAAGAAGAAGCATCAGCATTACACCTGAGATTGGTGATGATATCGTAAGGGCTGTACGTGCGATGAATGAAACACTGAAGCAGAATCGTCTTTTGAGAGAGCAAGGGGATAATAGCTCAACAGATAGCGTTGGGGACCTTCAGAAAAATGTGTCAAATTTCCATCGAGATGGTCATGAGGGATCTACTTTGAATTCTCTTCCACCTGATCAAGTAAATTCCCAGAAAGCAATGTCATTACCCTCTTCACCGCATGGTTACAGGGGTCAGACATCTGAGACAAGTGGACTGTCGAGATATGGAGTGAACGAATTGCAGTCAACATGGAATAAAATCCTTGAATCTTCAATGTTTAATAATAAACCCCTCTTACCATATGAAGAATGGAATATTGACTTCTCAGAAATAACTGTTGGAACCCGTGTCGGGATTGGGTTTTTCGGAGAAGTCTTCCGTGGTGTATGGAATGGCACAGACGTTGCTATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTTCGACATCCAAATGTAATCTTATTTCTTGGGGCGTGTACAAAGCCTCCACGCTTGTCAATGGTTACTGAGTACATGGAAATGGGGTCACTGTATTATTTGATCCATTTGAGTGGCGAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTGAAGATGTTGCGAGATATATGCAGGGGGCTGATGTGCATACACCGAATGAAGATAGTGCACCGTGACCTGAAAAGTGCAAATTGTCTTGTGAATAAACATTGGACTGCGAAAATCTGTGATTTTGGGCTTTCAAGGATCATGACAGAGTCTAGTATCAAAGACGCTTCATCGGCCGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGGAATGAACCATTCAATGAAAAGTGCGATATATTTAGCCTTGGGGTGTTGATGTGGGAGCTTTGTACTTTGAACAGGCCATGGGAGGGTATTCCACCAGAAAGGGTGGTTTATGCTGTTGCTAACGAGGGATCTAGACTGGAGATTCCTGAAGGCCCGTTAGGCAAGCTCATTGCAGATTGTTGGGCAGAACCAAATGAACGGCCAAATTGTGAGGAGATCCTCTGTCGCTTGCTTGATTGCGAGTACTCCATGTGCTGA | 2448 | 0.4285 | MEVWSRGLQLQDMDERRNDAGLADQGPSNTAWWPSDFVEKFGSVSLGSQEETLNNKESPRHFEKDVLSPHKASQILWHTGMLSEPIPNGFYSVIPDKRLKEIFDNIPTMDEIHALGAEGLKADVILVDAEKDKKVSMLKQYVVALVKGLNSNPAAIIRKITGLVSDFYKRSNVESPAKAALEETSHMFENRGAQILGQIKNGSCRPRAILFKVLADTVGLESRLMVGLPNDGVVEYVDSYKHMSVIVVLNSVELLVDLMRCPGQLLPRSNKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSEKVDADRAEKDENLPFQRRFDVSGPSLRNLMLRSNTSLDRKLSFSHSEPNIAIAFGRPSRRRVIAEQRTASSSPEHPSFKARGRSMLSGDRKAFRDFADDEAASRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQGDNSSTDSVGDLQKNVSNFHRDGHEGSTLNSLPPDQVNSQKAMSLPSSPHGYRGQTSETSGLSRYGVNELQSTWNKILESSMFNNKPLLPYEEWNIDFSEITVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGEKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTAKICDFGLSRIMTESSIKDASSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLNRPWEGIPPERVVYAVANEGSRLEIPEGPLGKLIADCWAEPNERPNCEEILCRLLDCEYSMC | 815 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele30g0767 | 815 | SUPERFAMILY | Protein kinase-like (PK-like) | 532 | 806 | IPR011009 | - | |
Lele30g0767 | 815 | SMART | serkin_6 | 559 | 808 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele30g0767 | 815 | Pfam | Protein tyrosine and serine/threonine kinase | 560 | 806 | IPR001245 | GO:0004672|GO:0006468 | |
Lele30g0767 | 815 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 378 | 807 | - | - | |
Lele30g0767 | 815 | MobiDBLite | consensus disorder prediction | 371 | 392 | - | - | |
Lele30g0767 | 815 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 678 | 690 | IPR008271 | GO:0004672|GO:0006468 | |
Lele30g0767 | 815 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 71 | 265 | - | - | |
Lele30g0767 | 815 | MobiDBLite | consensus disorder prediction | 480 | 518 | - | - | |
Lele30g0767 | 815 | FunFam | Serine/threonine-protein kinase isoform 1 | 549 | 637 | - | - | |
Lele30g0767 | 815 | ProSiteProfiles | Protein kinase domain profile. | 559 | 808 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele30g0767 | 815 | CDD | STKc_MAP3K-like | 565 | 807 | - | - | |
Lele30g0767 | 815 | MobiDBLite | consensus disorder prediction | 452 | 518 | - | - | |
Lele30g0767 | 815 | Gene3D | Transferase(Phosphotransferase) domain 1 | 638 | 814 | - | - | |
Lele30g0767 | 815 | Gene3D | Phosphorylase Kinase; domain 1 | 552 | 637 | - | - | |
Lele30g0767 | 815 | MobiDBLite | consensus disorder prediction | 284 | 304 | - | - | |
Lele30g0767 | 815 | MobiDBLite | consensus disorder prediction | 452 | 473 | - | - | |
Lele30g0767 | 815 | ProSitePatterns | Protein kinases ATP-binding region signature. | 565 | 586 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele30g0767 | Lele-ChrLele30 | 12036181 | 12045341 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele30g0767 | 13 | 815 | MAP Kinase Kinase Kinase | AT3G58640 | 71.376 | 0.0 | 1187 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL_CTR1-DRK-1 | Lele30g0767 | PK_Tyr_Ser-Thr | 1.4e-60 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele09g0786 | 09 | 6205539 | 6208630 | Lele30g0767 | 30 | 12036181 | 12045341 | CCT | |
Lele10g0714 | 10 | 5439644 | 5443197 | Lele30g0767 | 30 | 12036181 | 12045341 | CCT | |
Lele30g0767 | 30 | 12036181 | 12045341 | Lele31g0911 | 31 | 16509495 | 16516605 | hybridization | |
Lele30g0767 | 30 | 12036181 | 12045341 | Lele32g0615 | 32 | 3817959 | 3827265 | hybridization |