Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0767 ATGGAAGTGTGGTCACGTGGACTCCAGCTTCAAGACATGGATGAGAGACGAAATGATGCAGGGCTTGCAGATCAAGGGCCATCAAACACTGCATGGTGGCCATCAGACTTTGTTGAAAAATTTGGATCTGTTTCTCTGGGTTCTCAAGAAGAGACCTTAAATAACAAAGAATCACCTAGACATTTTGAGAAAGATGTTTTGTCTCCTCATAAAGCATCGCAAATTCTCTGGCATACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCTGATAAAAGGCTCAAGGAAATTTTTGATAATATTCCTACTATGGATGAGATTCATGCTTTGGGTGCAGAGGGTCTAAAGGCTGATGTCATTTTGGTGGACGCAGAGAAAGATAAAAAAGTATCTATGTTGAAGCAATATGTCGTGGCCCTAGTGAAAGGATTGAACTCAAATCCAGCTGCGATAATAAGAAAGATAACTGGACTAGTTTCTGATTTTTATAAACGATCAAATGTGGAAAGTCCAGCAAAAGCTGCACTAGAGGAAACCTCCCACATGTTTGAGAATCGAGGTGCCCAGATACTGGGACAAATAAAGAATGGTTCATGCCGTCCTCGAGCAATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTTGAAAGTAGGCTCATGGTGGGTTTGCCAAACGATGGGGTTGTTGAATATGTAGACTCATACAAGCATATGTCAGTGATTGTTGTATTAAATTCTGTGGAACTGCTGGTTGATCTCATGCGATGCCCTGGTCAATTATTACCTCGATCAAACAAGGCAATTTTCATGACACATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCACTAGAACCAAACAGCCCTTTGTATGGGGTTTCAGAGAAAGTGGATGCTGATAGAGCTGAAAAGGATGAGAACCTCCCATTCCAGAGGAGATTTGATGTATCAGGCCCTTCTTTGCGAAATTTGATGTTACGGTCAAATACCAGTCTGGATAGGAAATTGAGTTTTTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGGCCTAGTCGAAGAAGGGTCATTGCAGAACAGAGGACAGCTAGTTCCAGTCCAGAGCATCCATCTTTTAAAGCACGGGGACGGTCAATGCTTAGTGGTGATAGGAAAGCATTCAGAGACTTTGCCGATGATGAGGCTGCATCAAGGTCAGATGGTGCATCTTCATCAGAAGCTCGTAGGATTAGAAGAAGAAGCATCAGCATTACACCTGAGATTGGTGATGATATCGTAAGGGCTGTACGTGCGATGAATGAAACACTGAAGCAGAATCGTCTTTTGAGAGAGCAAGGGGATAATAGCTCAACAGATAGCGTTGGGGACCTTCAGAAAAATGTGTCAAATTTCCATCGAGATGGTCATGAGGGATCTACTTTGAATTCTCTTCCACCTGATCAAGTAAATTCCCAGAAAGCAATGTCATTACCCTCTTCACCGCATGGTTACAGGGGTCAGACATCTGAGACAAGTGGACTGTCGAGATATGGAGTGAACGAATTGCAGTCAACATGGAATAAAATCCTTGAATCTTCAATGTTTAATAATAAACCCCTCTTACCATATGAAGAATGGAATATTGACTTCTCAGAAATAACTGTTGGAACCCGTGTCGGGATTGGGTTTTTCGGAGAAGTCTTCCGTGGTGTATGGAATGGCACAGACGTTGCTATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTTCGACATCCAAATGTAATCTTATTTCTTGGGGCGTGTACAAAGCCTCCACGCTTGTCAATGGTTACTGAGTACATGGAAATGGGGTCACTGTATTATTTGATCCATTTGAGTGGCGAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTGAAGATGTTGCGAGATATATGCAGGGGGCTGATGTGCATACACCGAATGAAGATAGTGCACCGTGACCTGAAAAGTGCAAATTGTCTTGTGAATAAACATTGGACTGCGAAAATCTGTGATTTTGGGCTTTCAAGGATCATGACAGAGTCTAGTATCAAAGACGCTTCATCGGCCGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGGAATGAACCATTCAATGAAAAGTGCGATATATTTAGCCTTGGGGTGTTGATGTGGGAGCTTTGTACTTTGAACAGGCCATGGGAGGGTATTCCACCAGAAAGGGTGGTTTATGCTGTTGCTAACGAGGGATCTAGACTGGAGATTCCTGAAGGCCCGTTAGGCAAGCTCATTGCAGATTGTTGGGCAGAACCAAATGAACGGCCAAATTGTGAGGAGATCCTCTGTCGCTTGCTTGATTGCGAGTACTCCATGTGCTGA 2448 0.4285 MEVWSRGLQLQDMDERRNDAGLADQGPSNTAWWPSDFVEKFGSVSLGSQEETLNNKESPRHFEKDVLSPHKASQILWHTGMLSEPIPNGFYSVIPDKRLKEIFDNIPTMDEIHALGAEGLKADVILVDAEKDKKVSMLKQYVVALVKGLNSNPAAIIRKITGLVSDFYKRSNVESPAKAALEETSHMFENRGAQILGQIKNGSCRPRAILFKVLADTVGLESRLMVGLPNDGVVEYVDSYKHMSVIVVLNSVELLVDLMRCPGQLLPRSNKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSEKVDADRAEKDENLPFQRRFDVSGPSLRNLMLRSNTSLDRKLSFSHSEPNIAIAFGRPSRRRVIAEQRTASSSPEHPSFKARGRSMLSGDRKAFRDFADDEAASRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQGDNSSTDSVGDLQKNVSNFHRDGHEGSTLNSLPPDQVNSQKAMSLPSSPHGYRGQTSETSGLSRYGVNELQSTWNKILESSMFNNKPLLPYEEWNIDFSEITVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGEKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTAKICDFGLSRIMTESSIKDASSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLNRPWEGIPPERVVYAVANEGSRLEIPEGPLGKLIADCWAEPNERPNCEEILCRLLDCEYSMC 815
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0767 815 SUPERFAMILY Protein kinase-like (PK-like) 532 806 IPR011009 -
Lele30g0767 815 SMART serkin_6 559 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0767 815 Pfam Protein tyrosine and serine/threonine kinase 560 806 IPR001245 GO:0004672|GO:0006468
Lele30g0767 815 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 378 807 - -
Lele30g0767 815 MobiDBLite consensus disorder prediction 371 392 - -
Lele30g0767 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Lele30g0767 815 Pfam Ethylene-responsive protein kinase Le-CTR1 71 265 - -
Lele30g0767 815 MobiDBLite consensus disorder prediction 480 518 - -
Lele30g0767 815 FunFam Serine/threonine-protein kinase isoform 1 549 637 - -
Lele30g0767 815 ProSiteProfiles Protein kinase domain profile. 559 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0767 815 CDD STKc_MAP3K-like 565 807 - -
Lele30g0767 815 MobiDBLite consensus disorder prediction 452 518 - -
Lele30g0767 815 Gene3D Transferase(Phosphotransferase) domain 1 638 814 - -
Lele30g0767 815 Gene3D Phosphorylase Kinase; domain 1 552 637 - -
Lele30g0767 815 MobiDBLite consensus disorder prediction 284 304 - -
Lele30g0767 815 MobiDBLite consensus disorder prediction 452 473 - -
Lele30g0767 815 ProSitePatterns Protein kinases ATP-binding region signature. 565 586 IPR017441 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele30g0767 Lele-ChrLele30 12036181 12045341 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0767 13 815 MAP Kinase Kinase Kinase AT3G58640 71.376 0.0 1187
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lele30g0767 PK_Tyr_Ser-Thr 1.4e-60 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0786 09 6205539 6208630 Lele30g0767 30 12036181 12045341 CCT
Lele10g0714 10 5439644 5443197 Lele30g0767 30 12036181 12045341 CCT
Lele30g0767 30 12036181 12045341 Lele31g0911 31 16509495 16516605 hybridization
Lele30g0767 30 12036181 12045341 Lele32g0615 32 3817959 3827265 hybridization