Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0764 ATGGCTGAGAGTGAGAGATCAATTTACATATCAAACGAAAAGAAGAACGAAGATAGTAACAACAACAACAAAATTAGAGCCAAACCCTCTTCATCGTCTTCTTCTTCTCTGCTTGTTCAAAAGGGTTCGTTGTTTGACCTGAACGAAGAAGCTGTGGACGATCTTGGTGGTGACGTTAATGGAGGATCGTCGTCGTCATTCTCATCAGGAGAAGGTAATGCGAGTAGCAACAACTCAAGTTCAGAAGTGAGAGAGAGAACAACGAGTAGTGTGAGACAATATGTGAGATCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTTGCTTTTGTTCGTTCTGTAGAAAGGCTTGGTGGACTGGAAAAAGCAACGCCCAAGTTAGTTTTACAGTTGATGAATGTGAGAGGACTTAGCATTGCTCATGTTAAGAGTCATCTGCAGATGTATCGGGGCAAGAAACTTGATGAGTCTGGCCGAGTTTTATCCCAAAATAGGGCAACATTAATGCAAGGACACAGAAATCATCATATTTTGGATATGTACGAAAGATTTAGGGCTCATCATCATCATCAAGGAGGACACTTTGGGATTGATGGCTATCTCCCAACACCATCTCTCGTTGTGAAGCCAATATTCGACTTTAAATCTCATGGCTCTTCAAGATTTCAACCAGGGACAAGATCAAGTTCATCAGTAGCATATGAGGTTGGTAAAGACAGAAGGATGATGAGTCAGAGGAACACGAAGATTATTGGAGGATGTACCCTAATTGAGGTTAACGATGAAACTAATATTAGAATAAGAAATGGACCTCTTAGGGCAAACCTATTTGTGGAAGACGAGAAATGGCCTCCTCGTGAAAGAAATGACAAACCTTATTGGGATGACAAATATTGTACATGGAACACCACAAATTGCTTCATCAATAATAGTAACCTTCAACATCAACCTACCCACCTCAACTTTGATGCCCAGGGTCATCATCATGATCAAAAAGATGGGACGCTGCATTTCCTGAGATATCAGAATCATTTATCAGAAGCAAGTGCAGTTAAAGGTCAAGTAGAGAGTTATTTGAAGGAGAAGAAGGAACCACCCTGCAGTTTTCTAAAGCCATGTTTAACCCAAGATTCTTCGAATAATGTTGCAGAAGTGAACAATCCTTGTCCTCCAGATAATGATGGAGGAATCAATACGATGTTGTCTCTTTCATTGTAA 1224 0.4077 MAESERSIYISNEKKNEDSNNNNKIRAKPSSSSSSSLLVQKGSLFDLNEEAVDDLGGDVNGGSSSSFSSGEGNASSNNSSSEVRERTTSSVRQYVRSKMPRLRWTPDLHLAFVRSVERLGGLEKATPKLVLQLMNVRGLSIAHVKSHLQMYRGKKLDESGRVLSQNRATLMQGHRNHHILDMYERFRAHHHHQGGHFGIDGYLPTPSLVVKPIFDFKSHGSSRFQPGTRSSSSVAYEVGKDRRMMSQRNTKIIGGCTLIEVNDETNIRIRNGPLRANLFVEDEKWPPRERNDKPYWDDKYCTWNTTNCFINNSNLQHQPTHLNFDAQGHHHDQKDGTLHFLRYQNHLSEASAVKGQVESYLKEKKEPPCSFLKPCLTQDSSNNVAEVNNPCPPDNDGGINTMLSLSL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0764 407 Gene3D - 99 156 - -
Lele30g0764 407 MobiDBLite consensus disorder prediction 59 91 - -
Lele30g0764 407 SUPERFAMILY Homeodomain-like 98 153 IPR009057 -
Lele30g0764 407 MobiDBLite consensus disorder prediction 1 37 - -
Lele30g0764 407 MobiDBLite consensus disorder prediction 55 91 - -
Lele30g0764 407 MobiDBLite consensus disorder prediction 1 22 - -
Lele30g0764 407 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 100 154 IPR006447 GO:0003677
Lele30g0764 407 MobiDBLite consensus disorder prediction 23 37 - -
Lele30g0764 407 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 75 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0764 Lele-ChrLele30 12015515 12018075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0764 86 184 G2-like Transcription Factor Family AT2G42660 61.616 4.60e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele30g0764 None None None