Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0760 ATGAATGAAATATGCAAAATTATATTATCGTCGATAAGGAAGTACCCCTGTATCTGGAATTTTGGACTTTGGACAACCCCCGAGCTTCTGTGCTGTGTCTCTAAACCTCCGAAAGGCCCTCTGGTTCGTGCACACTCATACGAAGCCCCCCCCACTCCTATGGCGGCCCTGAAGCTGCTTATCTCTCAAGCTCGCCGCCATTACCTCACCAATCATCATTCTCATCTCCACCCTTCCCTTTTTCTTGGGTCTCGGAGATCCCTTTGTTCTTCTTCTTCACAATCCGACGAATCAGACACGAAACCTACACCCCCTCCAAGTAGACCGTCCCCAACCATTTCAATACAGCCTGTTTCATACCCCGTTAAACCTAAAGATCCCTCACCTCTAGATACTACTGAATCCTCCGAAGCTCAATTACAAAGTCAATCGCCGGCGACACCACCTCCTCGCCGTCCACGTGGACCGACATTGGCGGAAGATACCGCGGAATCACGGCGGGCTTGGACCAGGGAAGATATTCGGTATGTAAAGGACGCGCCTTCGATATCGCCGGTGTCCTATCCTTTGCGAGTGGCGCCACTTCCTGAAGATAAGAGTACTGCTGGTGCTGAAGCAGGAAAGGATGGTGGTGCGAATGCGAACGAAGAAATTGAGAAGGAGACTAGAAAAATTAGGGCGGATGATCAGTTAAAGAGGAGAGTTATCAGAGCAGCAGAAGAAGAGAAGGTGCGGGTTCCATTTCCAACTCTGATAAAGGCGAAGCAAAAGGAGAAGCCGCCTATCCTTGATTTGACGGAGGCAATTCGCCAAATTAAGGCCAATGCAAAGGCAAAATTTGATGAAACTGTTGAAGTGCATGTAAGATTGGGTATTGAATCAAAGCGAACAGAACTGGCAGTTCGTGGTACTATGACTCTGCCTCATGGTGCCCCTAAGGCCGTCAGTGTGGCTGTTTTTGCAGAAGGAGCTGACGCAGAGGAAGCTAGAGCTGCAGGAGCTGATATAGTTGGTGGTAAAGAGCTTATTGAGGAGATTGCTAATGGTAATAACAAGCTTAGAGTTGACAAGTGCTTCTCAACTCCAGGAATGGCGCCTCATCTTGGAAAGATAGCACAATATCTTAGAAAACGTAGACTGATGCCAGACAAGAAACTAGGTACTCTGACCAGTGATATTCCTGGGCAGTTGAAAGAGTTAAGACGGGGTCGTGTTGAGTTTAAAATGGAGAGTAAATCAATTGTGCATGTGGGAGTTGGAAAGGTAAGCTTCAAAGAGGATCAATTACGTGAAAACCTAGGTGCATTCATGAATGCTCTATTGGTTGCCAAGCCTGCTGGCTTAAAGAAGACTTCAAAATATGCTGGGTATGTCCTATCTGTCCATATGTGCAGCACGATGGGCCCAGGATTCCCGGTTTCAATACAATCTTTATCAAGAGCAGCTGATAATTACAAGTCTCTGAATGTGGTATGA 1476 0.4702 MNEICKIILSSIRKYPCIWNFGLWTTPELLCCVSKPPKGPLVRAHSYEAPPTPMAALKLLISQARRHYLTNHHSHLHPSLFLGSRRSLCSSSSQSDESDTKPTPPPSRPSPTISIQPVSYPVKPKDPSPLDTTESSEAQLQSQSPATPPPRRPRGPTLAEDTAESRRAWTREDIRYVKDAPSISPVSYPLRVAPLPEDKSTAGAEAGKDGGANANEEIEKETRKIRADDQLKRRVIRAAEEEKVRVPFPTLIKAKQKEKPPILDLTEAIRQIKANAKAKFDETVEVHVRLGIESKRTELAVRGTMTLPHGAPKAVSVAVFAEGADAEEARAAGADIVGGKELIEEIANGNNKLRVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIPGQLKELRRGRVEFKMESKSIVHVGVGKVSFKEDQLRENLGAFMNALLVAKPAGLKKTSKYAGYVLSVHMCSTMGPGFPVSIQSLSRAADNYKSLNVV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0760 491 SUPERFAMILY Ribosomal protein L1 257 474 IPR023674 -
Lele30g0760 491 FunFam 50S ribosomal protein L1 310 403 - -
Lele30g0760 491 MobiDBLite consensus disorder prediction 193 223 - -
Lele30g0760 491 CDD Ribosomal_L1 265 473 IPR028364 -
Lele30g0760 491 MobiDBLite consensus disorder prediction 129 145 - -
Lele30g0760 491 Gene3D - 310 403 IPR016095 -
Lele30g0760 491 MobiDBLite consensus disorder prediction 87 166 - -
Lele30g0760 491 Gene3D - 265 473 - -
Lele30g0760 491 Pfam Ribosomal protein L1p/L10e family 273 469 IPR028364 -
Lele30g0760 491 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 178 484 - -
Lele30g0760 491 MobiDBLite consensus disorder prediction 87 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0760 Lele-ChrLele30 11980590 11986029 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0760 30 11980590 11986029 Lele31g0903 31 16440198 16450483 hybridization
Lele30g0760 30 11980590 11986029 Lele32g0621 32 3881247 3885416 hybridization