Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0749 ATGACAGCGGCATACATTTCTGATTTCTCTTATATGGCCTCTTCGCAAGAGCTTTCTATATCTATATATAATGCAATCCTTGTAGTATGGACTCATCACAGCAGATTTTCAGTTACAGATACTGATGCTGGACTAATTAATTCATCATCTCATCCGGCTTTTTCATCGGTACCTAGCAGGCTGCTTGAATCCTTCAAAATGGACTTAGGAAACTCACCTAATTCCTCCTTTTCTAATTATAATCACTTTGATTCTGATTCTCTTTCAACATTGAGTGACAGCCAGGATAATAATAAATACAGTTATGGTGAGATCCTTTCTGGTTTGAGCCCTTCTTGTGACTCTTCGCCGCTGGAAACCAATCACAATTGGCACAATTCAATGCCGTCCATGGATTGTCGCCAAGATGCACCGCGTCTATATTCTTCTAGAAGCTCTCTTCTGAATGATGTAAATTGCAGCCAGAAAATCAGACATGTTCTGCAAGGAATAGAATCAACTCTAATGGCCCCTAACAATGGTAATGAAGCAACCTCATCAAATAGCCCGTTGATGACTTCTGGCCGAAGAAACTTATCTTGGAGTCATGACCAGGGTTTACAGAGTTTTCAAACTCCGCCATCTTTTGCTTCTAGTAGTAGTCAGCAGTTGAGTGAAGCTGCACAAGCAGAGAAACGTCAGAAAGCAATAATAGAGGAAGAACTGGTGCAAGGTTTTCCACCAACAAGTAATTTGAGACAGTTGTTGATTGCATGTGCGAAAGCGCTTTCAGAGAACAACCTGAAAGATTTTGGTCTGTTGATTGAAAGGGCTAGGAGTTCTGTGTCTATCACCGGCAAGCCAATCCAACGGCTCGGGGCTTATTTGGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCCGGGAACAACATTTATCGTTCTCTCAAGTGCAAAGAACCAGAAGGCAAAGACTTGCTCTCTTATATGCAAATGCTATACGAAATCTGCCCATACTTGAAATTCGGTTACATGGCCGCGAATGGAGCCATCGCAGAAGCTTGCAGAAACGAGGACCGTATTCACATCATAGACTTTCAGATTGCTCAGGGAACTCAATGGGTGACACTGCTTCAAGCTCTTGCAGCAAGACCTAGTGGGGCTCCTTATGTTAGGATCACAGGGATTGATGATCCTTTTTCTAACTATGCTCGTGGCAATGGGCTAGAGGCAGTTGGAAAACGGTTGGCCATGATCTCTGAGAAATTTCACATACCAGTTGAGTTTCATGGATTGCCAGTTTTCGGTCCTGATATCACCTGGGACATGTTTGACATCCGGCCCGGTGAGGCTTTGGCCGTGAACTTTCCTTTACAGCTCCATCATACAGCTGATGAAAGTGTTGATGTGAATAATCCAAGGGATGGTCTTCTGAGAATGGTTAAATCTCTATCTCCAAAAGTTGTCACATTGGTGGAACAAGAATCAAACACAAACACAACTCCTTTCTTCAACAGGTTCATAGAAACCTTGGATTTCTACTTGGCAATGTTCGAGTCCATCGATGTCACGCTCTCAAAAGACAACAAGGCGAGGATTAACGTTGAGCAACATTGTTTGGCGAGGGATGTTGTGAATGTCATTGCTTGTGAAGGGAAGGAAAGAGTAGAGCGACATGAACTGTTCGGAAAGTGGAAGTCAAGGTTGACAATGGCGGGATTTCAACAATATCCAATGAGCACATATGTAAATTCTGTGATTCGGAGCCTGCTGAGATACTATTCAGAGAATTATACACTGGTGGACAAGGATGGTGCAATGTTGTTGGGGTGGAAGAGTAGAAATCTGATATCAGCCTCAGCATGGCATTGA 1848 0.4324 MTAAYISDFSYMASSQELSISIYNAILVVWTHHSRFSVTDTDAGLINSSSHPAFSSVPSRLLESFKMDLGNSPNSSFSNYNHFDSDSLSTLSDSQDNNKYSYGEILSGLSPSCDSSPLETNHNWHNSMPSMDCRQDAPRLYSSRSSLLNDVNCSQKIRHVLQGIESTLMAPNNGNEATSSNSPLMTSGRRNLSWSHDQGLQSFQTPPSFASSSSQQLSEAAQAEKRQKAIIEEELVQGFPPTSNLRQLLIACAKALSENNLKDFGLLIERARSSVSITGKPIQRLGAYLVEGLVARKEASGNNIYRSLKCKEPEGKDLLSYMQMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWVTLLQALAARPSGAPYVRITGIDDPFSNYARGNGLEAVGKRLAMISEKFHIPVEFHGLPVFGPDITWDMFDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDFYLAMFESIDVTLSKDNKARINVEQHCLARDVVNVIACEGKERVERHELFGKWKSRLTMAGFQQYPMSTYVNSVIRSLLRYYSENYTLVDKDGAMLLGWKSRNLISASAWH 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0749 615 MobiDBLite consensus disorder prediction 169 191 - -
Lele30g0749 615 Pfam GRAS domain family 245 614 IPR005202 -
Lele30g0749 615 MobiDBLite consensus disorder prediction 202 221 - -
Lele30g0749 615 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 202 611 IPR005202 -
Lele30g0749 615 ProSiteProfiles GRAS family profile. 236 615 IPR005202 -
Lele30g0749 615 Coils Coil 214 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0749 Lele-ChrLele30 11928953 11931315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0749 244 614 GRAS Transcription Factor Family AT5G48150 62.903 7.27e-171 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele30g0749 GRAS 3.9e-124 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0749 30 11928953 11931315 Lele31g0887 31 16328986 16330746 hybridization
Lele30g0749 30 11928953 11931315 Lele32g0631 32 3939602 3941251 hybridization