LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele30g0745	ATGCCAAGAGTGTGGTTCTCTCTGAAAAGATCTCTTCACTGCAAATCAGAAACTTCAGACGTTCACGAGCCGAATTCCAAAAACCATTTAACCGCAATCTCAAGAAGATCCGGGTGTTCCAGAAGCTTCGCCAATCTCAAAGACATCATCAATGGAGAAAGCAGCAGAAGGCATAACTTCGAGAAGCCTCCGAGTTGCAGCCCGAGATCGATTGGAAGCAGCGAGTTCCTCAACCCAATAACCCATGAAGTCATTCTCAGCAACACCACTTGTGAGCTCAAAATCGCCGGCATCGCCGGCGGCGGAGGCTCAACATTTGTGGGTACTCTAAGGCCTGGAACTCCTTCTTCGTTCAGGAACAGTGCTTCTTCAACTCCAAGAAAATCATCTCCTTTGCTCATATCAGATTCGGAAGGAGGATTTGGAACAAGCAAAAGGTTGGTGTTGTTGGTTGATTCTGAAAATTGTTGTTTCTTATCTTGTTTTGGCCACACAGTGACAGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATAATATGCAGAACAAGCTGGATGAAGGCGGAGAAGAATTGTTCAAGAATACTGGACAAGGTTCTGAAAGTGCACAACACTCAGCAAAATCTAGCTCGCTTCGAAGAGTACAGAGACAGCGTCAAGATGAGAGCCAGCAAGCTCCAGAAGAAGCACCCTCGCTGCCTCGCCGACGGCAACGAGCTCCTCCGCTTCTACGCCACCACTCTCTCCTGCTCTCTCGGCTTCACCACCTACACCCTCTGCGTCTCTGACAACTGCTGCGTCTGCAGAATCATCAGAAACGGCTTCTCCGTCAAGGAAGAGGTCAAGAACGGGAACGGGAACGGGATATTCACGGCGTTAACGAGCGGAAGAGCGTTGGAGAGTGTTGACGATGACGACGGGGGTGGCGGGGACGAAGGAAGGGAAAAGAAGAAGAAGGTGTTGATAGTGTGTAGGGTTATAGCAGGGAGGGTTCATAGGCCATTGGAGAATGTGAAGGACATGGTTGGAATTCACAATGGCTTTGATTCATTGGCTGGAAAACTTGGGGTTTATTCTAACATTGAGGAGCTTTATTTGCTCAATCCCTCTTCTCTTCTTCCTTGTTTTGTTGTCATTTGTAAACCTTGA	1155	0.4788	MPRVWFSLKRSLHCKSETSDVHEPNSKNHLTAISRRSGCSRSFANLKDIINGESSRRHNFEKPPSCSPRSIGSSEFLNPITHEVILSNTTCELKIAGIAGGGGSTFVGTLRPGTPSSFRNSASSTPRKSSPLLISDSEGGFGTSKRLVLLVDSENCCFLSCFGHTVTELVEGDSSRKIVEIICRTSWMKAEKNCSRILDKVLKVHNTQQNLARFEEYRDSVKMRASKLQKKHPRCLADGNELLRFYATTLSCSLGFTTYTLCVSDNCCVCRIIRNGFSVKEEVKNGNGNGIFTALTSGRALESVDDDDGGGGDEGREKKKKVLIVCRVIAGRVHRPLENVKDMVGIHNGFDSLAGKLGVYSNIEELYLLNPSSLLPCFVVICKP	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele30g0745	384	FunFam	C2H2-like zinc finger protein	165	383	-	-
	Lele30g0745	384	Gene3D	-	163	383	-	-
	Lele30g0745	384	MobiDBLite	consensus disorder prediction	115	132	-	-
	Lele30g0745	384	PANTHER	C2H2-LIKE ZINC FINGER PROTEIN	4	382	-	-
	Lele30g0745	384	MobiDBLite	consensus disorder prediction	115	135	-	-
	Lele30g0745	384	SUPERFAMILY	ADP-ribosylation	166	383	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele30g0745	Lele-ChrLele30	11890284	11892546	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele30g0745	1	384	C2H2 Transcription Factor Family	AT5G54630	55.556	8.67e-154	440