Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0740 ATGCAGGTTGTTGTTCACTTTTCTGCTAGCTGGTGCATGCCTTCTGTCGCCATGAATCCTTCCTTTCAAAACCTTTCTTCTTCCTATCAACATGTCCTCTTCTTCATGCTTGATGTTGACGAGGTTCAGGAAGTAGCAACGAAGATGGAAATAAAGGCCATGCCAACATTTGTGATGCTAAGTGGAAGGAATGAAATGGACAGGGTGGTGGGAGCAAATCCTGAGGAGCTCAAGAAAAGAATTGATGCTTTTCTTACTCACAACTCTCTCTAG 273 0.4359 MQVVVHFSASWCMPSVAMNPSFQNLSSSYQHVLFFMLDVDEVQEVATKMEIKAMPTFVMLSGRNEMDRVVGANPEELKKRIDAFLTHNSL 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0740 90 Pfam Thioredoxin 2 82 IPR013766 -
Lele30g0740 90 CDD TRX_family 3 82 - -
Lele30g0740 90 Gene3D Glutaredoxin 1 89 - -
Lele30g0740 90 SUPERFAMILY Thioredoxin-like 3 86 IPR036249 -
Lele30g0740 90 ProSiteProfiles Thioredoxin domain profile. 1 86 IPR013766 -
Lele30g0740 90 PANTHER THIOREDOXIN-LIKE PROTEIN 1 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0740 Lele-ChrLele30 11857424 11859224 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0740 30 11857424 11859224 Lele31g0878 31 16269880 16272449 hybridization
Lele30g0740 30 11857424 11859224 Lele32g0641 32 4005647 4008150 hybridization