Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0739 ATGGTTTCCCCGGAAAACTCCAATTGGTTTATCGATTATGGCCTGATTGACGACATATCTGTCCCTGATGGGAACGTCACTGTCCATGCCTCCGGGTTCACCTGGCCGGCGCAGGCCATAAATGGTTCTTCAAATGTCAGCATGGAAATTGATGGCTCATTGGGGGATTCTGATGGCCTCAAAGGGTCTGGTTCAAAGAAGAGGAGTAGATCTGATTCATGTACCGCTTCCAGCTCCAAGGCATGTCGTGAGAAATTGCGCAGGGATAGGTTGAATGACAAGTTTCTTGAATTAGGCTCCATTTTGGAGCCTGGAAAGCCTCCCAAAATAGACAAAGCTGCCATTTTGATTGATGCCGTGCGAATGGTGACACAGTTAAAGGGTGAAGCCCAGAAGTTGAAAGATTCAAATACGAGTCTTCAAGAGAAGATAAAAGAGTTGAAGGCTGAGAAGAATGAACTTCGTGATGAGAAACAGAGGTTCAAGGGAGAGAAAGAAAAGTTGGAGCAGAAGCTGAAAACCATCAACGTACAGCCTAGTTTCTTGCCTCCTCCACCTGCAATTCCTGCTGCATATGCTGCTGCCGCTCAAGGCCAAGTCCCGGGCAACAAGTTGGTACCATTTATCAGTTATCCAGGAGTTGCCATGTGGCAGTTTATGCCGGCAGCTGCAGTGGATACTTCACAGGATCATGTACTCCGTCCACCAGTTGCCTAA 717 0.4756 MVSPENSNWFIDYGLIDDISVPDGNVTVHASGFTWPAQAINGSSNVSMEIDGSLGDSDGLKGSGSKKRSRSDSCTASSSKACREKLRRDRLNDKFLELGSILEPGKPPKIDKAAILIDAVRMVTQLKGEAQKLKDSNTSLQEKIKELKAEKNELRDEKQRFKGEKEKLEQKLKTINVQPSFLPPPPAIPAAYAAAAQGQVPGNKLVPFISYPGVAMWQFMPAAAVDTSQDHVLRPPVA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0739 238 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Lele30g0739 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Lele30g0739 238 SMART finulus 81 132 IPR011598 GO:0046983
Lele30g0739 238 MobiDBLite consensus disorder prediction 51 78 - -
Lele30g0739 238 CDD bHLH_AtILR3_like 80 155 - -
Lele30g0739 238 FunFam Transcription factor bHLH34 66 124 - -
Lele30g0739 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 141 IPR036638 GO:0046983
Lele30g0739 238 Coils Coil 123 178 - -
Lele30g0739 238 PANTHER BHLH TRANSCRIPTION FACTOR 4 238 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lele30g0739 238 Gene3D - 78 155 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0739 Lele-ChrLele30 11851296 11853843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0739 1 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 70.833 4.02e-117 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele30g0739 HLH 3.6e-10 No_clan