Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0730 ATGCCGGCAACGCTAGTACGAACTCGAGAACGACCTTCCGGATGCTTCATTCAATTCATGCCGGATCAAGCATTCTCCAAGGTCACGTGGGTGGAGCATGTGGAAGTAGACAATAGAGATGTAAACTTGTTAACAGTTTCTGCAATAGTTCGCAAATACGAGTACTGTAAAATTCTCGAAGCAAAGTACTCTACCCCTGAAGATGCAGACGTTAGGGTCTCCACTAAAGAGCACCCAACAGAAATACCTGGACAACCTCCTGGTACTACACTCGTCTTCTCCACTTCTCGGTGGTTCCCTGTCACTCCTCGCCGGTTATTCGACTTCCTTCGTAACCCCGATTCCAGAACCACCTGGGATATGCTTGCGCGGGGAATGTGTGTTCAAGAACTGTCGTACATCGTCAAGGGCAAAGATTCCGCAAATCGTGTTTCTCTGTTAGAAGGCACTGATGACGAGGACACGTATGTGATACACTACATTCAAGAGAGCTACACGGACATAAGTGGGTCCTACTTGGTGTATGCACTGGGGGACGAACCAGCAGTAACAGCCCTATTGGAGGGCAGACAGGGTGGGGATTTTACCTTCAGATCACAGTTGTAA 606 0.4851 MPATLVRTRERPSGCFIQFMPDQAFSKVTWVEHVEVDNRDVNLLTVSAIVRKYEYCKILEAKYSTPEDADVRVSTKEHPTEIPGQPPGTTLVFSTSRWFPVTPRRLFDFLRNPDSRTTWDMLARGMCVQELSYIVKGKDSANRVSLLEGTDDEDTYVIHYIQESYTDISGSYLVYALGDEPAVTALLEGRQGGDFTFRSQL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0730 201 Pfam START domain 5 42 IPR002913 GO:0008289
Lele30g0730 201 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 8 42 IPR042160 -
Lele30g0730 201 SUPERFAMILY Bet v1-like 67 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0730 Lele-ChrLele30 11794113 11796566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0730 2 189 Homeobox Transcription Factor Family AT4G04890 32.129 1.36e-28 110