Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0727 ATGTGGAGATCAGACAGTGGAGAGGCAGCTGATTCTTACTATGAAATCCGGCCTGAGTGTATCGATGATGTCCCCAAGACCCGATTTAAGATCAAGGCTGGGAAAACGCTAAGTGTAAGAAAATGGCAGGCCGCATTTAATCCAGATGGATATCTGGATATAGGCAAGACCCTAAGTCGAATCCAACGTGGGGGAATACATCCATCAATAAGAGGAGAAGTTTGGGAATTCCTACTTGGTTGCTATGACCCAAATAGTTCAACAGAAGAAAGAGAACAGATTAGACAGCGCCGAAGGGTGCAATACAATACGTGGAAGGATCTATGCCAGAAACTGTTTCCACTGATAGGAAGTGGGAAATTCATAACGGCACCTGTAATAACTGAAGAAGGGCAACCAATTCAAGATCCATTAGTGCTCTTAGAAACAAACCCAGGACAAGGAGCAGTTATGCCTCCTCCTGATAACGCTCTCTCTTCTGAACCTCCAGCTGACTTAGAAAAGGTCACCGACAAGAGAATCATTCAGTGGATGTTAACTCTCCACCAAATAGGACTCGACGTTCTTCGCACTGATAGGACTTTGGCATTTTATGAGAAGCAAGAGAACTTGGCTAAATTATGGGACATTCTCGCTGTTTATGCTTGGGTCGACACCGACGTTGGTTATTGTCAAGGAATGAGTGATCTGTGCTCTCCAATGATAATGCTGTTGGAAGATGAAGGTGATGCCTTTTGGTGCTTTGAACGTCTCATGCGCAGATTGAGAGGGAATTTCAGATGTACTGATAGCTCCGTTGGTGTGGAGTCACAACTCAGTACCTTGGCTTCAATTACTCAAGTCCTTGACCCAAAACTTCATGAACATTTGGAGCATCTTGGTGGAGGTGATTATCTGTTTGCTTTCAGAATGCTTATGGTTTTGTTTCGTCGAGAATTCTCCTTCTGTGATTCTCTCTACCTTTGGGAGATGATGTGGGCTTTGGAGTATGATCCAGATTTGTTCCTGATGTATGAAGAGCCAGATTCAGACAGTGACAAGCCAGAGGAATTGAGGAAGAAGTCAAAGTCAAAGAGTCAATGTGGGAAATACGAGAGAGAGCAACTCAAGAATCATGCTGACGCTCCTCTTCCCATCTCTGTCTTCCTCGTCGCCAGTGTTCTCAAAGATAAGAGCGCCAAACTCCTCACTGAGGCTCGAGGCCTTGACGACGTCGTAAAGATACTGAATGACATGACTGGCAATCTTGATGCAAAGAAGGCTTGCACAGGAGCAATGAAACTCCACAAAAAATACTTGAAAAAGTTAATGGCAGTTAAGATTGGCCTGAAACTGGTGGCCCTTGGATCTGGCATAAGGATCTTTTACTTCGCAAATTTTCAGTAA 1386 0.4423 MWRSDSGEAADSYYEIRPECIDDVPKTRFKIKAGKTLSVRKWQAAFNPDGYLDIGKTLSRIQRGGIHPSIRGEVWEFLLGCYDPNSSTEEREQIRQRRRVQYNTWKDLCQKLFPLIGSGKFITAPVITEEGQPIQDPLVLLETNPGQGAVMPPPDNALSSEPPADLEKVTDKRIIQWMLTLHQIGLDVLRTDRTLAFYEKQENLAKLWDILAVYAWVDTDVGYCQGMSDLCSPMIMLLEDEGDAFWCFERLMRRLRGNFRCTDSSVGVESQLSTLASITQVLDPKLHEHLEHLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLMYEEPDSDSDKPEELRKKSKSKSQCGKYEREQLKNHADAPLPISVFLVASVLKDKSAKLLTEARGLDDVVKILNDMTGNLDAKKACTGAMKLHKKYLKKLMAVKIGLKLVALGSGIRIFYFANFQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0727 461 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 40 289 IPR035969 -
Lele30g0727 461 FunFam TBC1 domain family member 15-like 162 259 - -
Lele30g0727 461 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 267 432 IPR035969 -
Lele30g0727 461 Pfam Rab-GTPase-TBC domain 171 327 IPR000195 -
Lele30g0727 461 ProSiteProfiles TBC/rab GAP domain profile. 65 329 IPR000195 -
Lele30g0727 461 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 39 410 - -
Lele30g0727 461 MobiDBLite consensus disorder prediction 341 360 - -
Lele30g0727 461 Gene3D - 265 440 - -
Lele30g0727 461 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 164 259 - -
Lele30g0727 461 SMART tbc_4 62 352 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0727 Lele-ChrLele30 11775570 11780769 Dispersed/Wgd